FC932372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42 Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LV NK+D+ +K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42 Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LV NK+D+ +K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.188e-42 Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LV NK+D+ +K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.552e-42 Identity = 89/162 (54.94%), Postives = 107/162 (66.05%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEFSFHLPDI 712 ++KLLL+GDSGVGKSCLLLR KIRTIE GKRIKLQ+WDTAG+ERFRTITTAYYRGAMGI+L+YDVTD SF N+ NW + + QHA+++ LV NK D DE R V +GQ LA + + F E SAK+N NV + L I Sbjct: 14 IMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCD-DEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASI 174
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.552e-42 Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LV NK+D+ +K+ V + + AD G+ F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.027e-42 Identity = 86/152 (56.58%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRT+T++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LV NK+D+ +K+ V + + AD G+ F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.027e-42 Identity = 88/152 (57.89%), Postives = 109/152 (71.71%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD S+ N++ W++ I+++AS+NVNK+LV NK+D+ +K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.515e-42 Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTI LDGK IKLQIWDTAG+ERFRTIT++YYRGA GI++VYDVTD SFNN++ W++ I+++A D+V ++LV NK D+ E K+ V TS + AD GI F ETSAK++ NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIE-KKIVDTSTAREYADSVGIPFLETSAKSSANV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.897e-42 Identity = 88/152 (57.89%), Postives = 108/152 (71.05%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KIRTIELDGK +KLQIWDTAG+ERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LV NK+DM + K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTD-KKVVEYTVAKEFADSLGIPFLETSAKNASNV 158
BLAST of FC932372 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.006e-41 Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 2 Query: 227 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGRERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVENKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV 682 L KLLLIGDSGVGKSCLLLR KI+TIELDGK IKLQIWDTAG+ERF TIT++YYRGA G L+VYDVTD+ S+ N++ W++ I++HAS+NVNK+LV NK+D+ +K+ V + + AD GI F ETSAK NV Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNV 158 The following BLAST results are available for this feature:
BLAST of FC932372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932372 ID=FC932372; Name=FC932372; organism=Citrus clementina; type=EST; length=737bpback to top |