FC932374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15 Identity = 57/191 (29.84%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 120 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 692 ++ GSL +++LW + ++ RT GH + S+ HP G AS S+DS ++++DV + + V + F P G LA A S +VKLWD A +I T+ +S V V + P+ +A GS D T+ ++D+ + + EG VRS++++P D L+S S++T Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDS-TVKLWDLIAGKMI-------------TEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP-DGSCLYSGSENT 253
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14 Identity = 57/199 (28.64%), Postives = 92/199 (46.23%), Query Frame = 3 Query: 96 ATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 692 A + L+ TGS+D T KLW + T +GH ++S++ + +G + S D V V+++ + I TL E+ QF+ + +A A S KLWD+ +ATL+ E VL V + G+ +A S DGT V+ + K L LEGH + + ++ R+L ++SD T Sbjct: 184 AFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATA-SMDKSCKLWDSLNGKCVATLTGHEDE-------------VLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKT 368
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.264e-14 Identity = 62/216 (28.70%), Postives = 95/216 (43.98%), Query Frame = 3 Query: 60 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 707 H+E V + P + L T S D T KLW+ D L+ T GH + VA HPSG + S D R++D++T A + E V+ + F G LA + G + ++WD I +KP V SV +SP+G +A G D ++D+ K L+ + H V + Y P + L +AS D V+++ Sbjct: 297 HKERATDVVFSPVDDC----LATASADRTAKLWKTDGTLLQ-TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG-ALAASCGLDSLARVWDLRTGRSILVFQ----GHIKP---------VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.956e-14 Identity = 53/220 (24.09%), Postives = 96/220 (43.64%), Query Frame = 3 Query: 120 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTA--------------------AWNLIATLSIPRPEGLKPTDKSSSK---------KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 692 + TGS D+T KLW + + T GH +V ++ +P + A+ S+D+ +++D+ + + TL +E+ + FD G + + G +V +WD + +W+ L+ + D +S K +L + G+ IA S DGT V++ T K + LEGH + + ++P R+L +SD T Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKT 368
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: REC14_SCHPO (Meiotic recombination protein rec14 OS=Schizosaccharomyces pombe GN=rec14 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.956e-14 Identity = 60/225 (26.67%), Postives = 94/225 (41.78%), Query Frame = 3 Query: 51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ---LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710 ENAH+ ++++ V L + S D +K W D + +E +T H LGV +A + S V V++ +TN + PSE W P G T+A + +WD P K ++ + KF L + +SP+GR I G G + + + H L GH PVRS+ +SP +L +A D + +YD Sbjct: 12 ENAHQADIYSLNVVAGN------LWSASGDSKIKKWSIGDAEHSLVEEIDTPHKLGVHHLATSLDENVVVSCGFGQDVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSV-DGRIAVWDN-------------PSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAFSP-GSTLLAAAGDSKMITIYD 215
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14 Identity = 55/192 (28.65%), Postives = 90/192 (46.88%), Query Frame = 3 Query: 117 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 692 L+ TGS+D T KLW + T +GH ++S++ + +G + S D V V+++ + I TL E+ QF+ + +A A S KLWD+ +ATL+ E VL V + G+ +A S DGT V+ + K L LEGH + + ++ R++ ++SD T Sbjct: 191 LIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATA-SMDKSCKLWDSLNGKCVATLTGHDDE-------------VLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKT 368
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14 Identity = 57/199 (28.64%), Postives = 91/199 (45.73%), Query Frame = 3 Query: 117 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 713 L+ TGS+D T KLW + T TGH ++S++ + SG + S D V V++ DT + TL +E+ F+ +L + G + KLWD +ATL+ E +L + G+ IA S DGT +F + + LEGH + + ++P R+L +SD T ++DA Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE-------------ILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKT-ARIWDA 374 HSP 2 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 53/198 (26.77%), Postives = 94/198 (47.47%), Query Frame = 3 Query: 123 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVA-AHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 713 +TGS D T KLW + T GH V ++A +P G A+ S D +++ V+T T +E+ + F+P+ +TL G + KLWD + + TL+ E ++S++++ G RI GS D T++V++ + ++ L GH + S V++ D ++ + S D ++DA Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQSGEEVFTLTGHSAE-------------IISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDA 290
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14 Identity = 54/198 (27.27%), Postives = 94/198 (47.47%), Query Frame = 3 Query: 117 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710 L++ GS ++++W + ++ RT GH V S+ HP G AS SLD+ ++++DV + + V ++F P G LA A SVKLWD A ++A L S K V + + P+ +A GS D T+ +D+ + + + EG +PVR++++S + D V+ ++ Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASA-SDDHSVKLWDLTAGKMMAEL-------------SEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSLRVYGWE 260
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14 Identity = 52/178 (29.21%), Postives = 88/178 (49.44%), Query Frame = 3 Query: 117 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 650 L++ GS ++++W + ++ RT GH V S+ HP G AS SLD+ ++++DV + + V ++F P G LA A SVKLWD A ++A L S K V + + P+ +A GS D T+ +D+ + + + EG +PVR++++S Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASA-SDDHSVKLWDLTAGKMMAEL-------------SEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFS 240
BLAST of FC932374 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 3 Query: 48 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTAAWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 692 + NAH++S+ + + P + +GS D ++K+WR D + E+T GH LG+ + + S S D V+VFDV + + TL+ + V+ F+P GT +A +G ++++W N I SIP E V SV ++ DG +A GS DG + ++D T + L + P+ + +SP +L S ++T Sbjct: 102 IPNAHKKSISGIKFSPDGR----YMGSGSADCSIKIWRMDFVY-EKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIA-SGSFDETIRIWCARNGNTI--FSIPGHEDP-----------VSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNT 298 The following BLAST results are available for this feature:
BLAST of FC932374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932374 ID=FC932374; Name=FC932374; organism=Citrus clementina; type=EST; length=727bpback to top |