FC932376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_MESAU (Eukaryotic peptide chain release factor subunit 1 OS=Mesocricetus auratus GN=ETF1 PE=1 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 1.589e-31 Identity = 70/104 (67.31%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKL NKVPPNGLV+Y GTI T++GKE Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKE 107
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_HUMAN (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 1.589e-31 Identity = 70/104 (67.31%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKL NKVPPNGLV+Y GTI T++GKE Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKE 107
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_BOVIN (Eukaryotic peptide chain release factor subunit 1 OS=Bos taurus GN=ETF1 PE=2 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 1.589e-31 Identity = 70/104 (67.31%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 D D+N RGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVLGAITS QQRLKL NKVPPNGLV+Y GTI T++GKE Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKE 107
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.030e-30 Identity = 70/105 (66.67%), Postives = 79/105 (75.24%), Query Frame = 2 Query: 140 GQET--DKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 G+ET D+N RGNGTSMISLI+PP+DQ+SRV+KML DEFGTASNIKSRVNR SVLGAITS Q RLKL KVPPNGLV+Y GTI T++GKE Sbjct: 3 GEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKE 107
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_PODAN (Eukaryotic peptide chain release factor subunit 1 OS=Podospora anserina GN=SU2 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.487e-29 Identity = 66/104 (63.46%), Postives = 75/104 (72.12%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 + E +KN RGNGTSMISLI+PP+DQ+SR KML +E+GTASNIKSRVNRQSVL AITS QQRLKL NKVPPNGLV+Y G I T +GKE Sbjct: 5 NANEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTASNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKE 108
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_CAEEL (Eukaryotic peptide chain release factor subunit 1 OS=Caenorhabditis elegans GN=erf-1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.942e-29 Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 RGNGTSMISLI+PP+DQV+R+ +ML +E+GTASNIKSRVNR SVLGAITS Q RLKL NKVPPNGLV+Y GTI TD+GKE Sbjct: 36 RGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKSRVNRLSVLGAITSVQGRLKLYNKVPPNGLVVYCGTIMTDEGKE 115
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_DICDI (Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium discoideum GN=erf1 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 6.248e-28 Identity = 65/104 (62.50%), Postives = 74/104 (71.15%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 D Q DK RGNGTSMISLI+ P DQ+++V KML +E+GTASNIKSRVNR SVLGAITSAQQRLKL KVP NGLV+Y GT+ TD+GKE Sbjct: 6 DQQNADKQVEQWKIKKLIKNLEAARGNGTSMISLIIRPGDQIAKVNKMLAEEYGTASNIKSRVNRLSVLGAITSAQQRLKLYTKVPDNGLVIYCGTMVTDEGKE 109
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_CRYHO (Eukaryotic peptide chain release factor subunit 1 OS=Cryptosporidium hominis GN=erf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.374e-27 Identity = 58/80 (72.50%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 RGNGTSMISL++ P+D++SR++KML DE+GTASNIKSRVNR SVL AITS QQRLKL N+ P NGLV+Y GT+ T+DGKE Sbjct: 24 RGNGTSMISLVIKPKDEISRISKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRTPQNGLVVYCGTLITEDGKE 103
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_YEAST (Eukaryotic peptide chain release factor subunit 1 OS=Saccharomyces cerevisiae GN=SUP1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24 Identity = 59/101 (58.42%), Postives = 68/101 (67.33%), Query Frame = 2 Query: 146 ETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 E +KN RGNGTSMISL++PP+ + KML DE+GTASNIKSRVNR SVL AITS QQ+LKL N +P NGLVLY G I T+DGKE Sbjct: 4 EVEKNIEIWKVKKLVQSLEKARGNGTSMISLVIPPKGLIPLYQKMLTDEYGTASNIKSRVNRLSVLSAITSTQQKLKLYNTLPKNGLVLYCGDIITEDGKE 104
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_SCHPO (Eukaryotic peptide chain release factor subunit 1 OS=Schizosaccharomyces pombe GN=sup45 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.923e-22 Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 2 Query: 212 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGK 445 GNGTSMI+LI+PP +Q+SR + ML +E+GTASNIKSRVNR SVL AITS ++RLKL NKVP NGLV+Y G + + K Sbjct: 26 GNGTSMITLIIPPGEQISRYSNMLAEEYGTASNIKSRVNRLSVLSAITSTRERLKLYNKVPDNGLVIYCGEVIMEGNK 103 The following BLAST results are available for this feature:
BLAST of FC932376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932376 ID=FC932376; Name=FC932376; organism=Citrus clementina; type=EST; length=448bpback to top |