FC932376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_GIALA (Eukaryotic peptide chain release factor subunit 1 OS=Giardia lamblia GN=ERF1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 9.662e-21 Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 2 Query: 212 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGK 445 G+GTS+ISL++PP +Q+S VT ML +E+GTASNIKSRVN+ +VL AITSA RLKL N++PPNGL +Y G I +DGK Sbjct: 35 GSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNKNAVLSAITSAMSRLKLYNRLPPNGLAVYCGEI-EEDGK 111
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.795e-20 Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 RG+GTSM+SLI+PP+ Q++ TK++ DEF A+NIK RVNRQSV A+ SA QRLKL + P NGL+LY G + ++GKE Sbjct: 27 RGSGTSMVSLIIPPKKQINDSTKLISDEFSKATNIKDRVNRQSVQDAMVSALQRLKLYQRTPNNGLILYCGKVLNEEGKE 106
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_BLEMU (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma musculus GN=eRF1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.924e-19 Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKL-DNKVPPNGLVLYTGTIGTDDG 442 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKL +N++P NGL+LY G + ++G Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEG 104
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_BLEAM (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma americanum GN=eRF1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.924e-19 Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKL-DNKVPPNGLVLYTGTIGTDDG 442 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKL +N++P NGL+LY G + ++G Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEG 104
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_OXYTR (Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha trifallax GN=ERF1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.488e-18 Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGK 445 +GNGTSM+SLI+PP+D +++ K+L E A NIKSR+ +QSV+ AITS +++LKL + P NGL LY G I +DGK Sbjct: 32 KGNGTSMVSLIIPPKDDINKYGKLLTGEMSAAQNIKSRITKQSVVTAITSTKEKLKLYKQTPTNGLCLYCGVIYMEDGK 110
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_STYMT (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia mytilus GN=ERF1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.705e-17 Identity = 41/79 (51.90%), Postives = 58/79 (73.42%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGK 445 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKL + P NGL +Y G I +DGK Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGK 110
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_STYLE (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia lemnae GN=ERF1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.705e-17 Identity = 41/79 (51.90%), Postives = 58/79 (73.42%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGK 445 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKL + P NGL +Y G I +DGK Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGK 110
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_DIDNA (Eukaryotic peptide chain release factor subunit 1 OS=Didinium nasutum GN=eRF1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.705e-17 Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 +G+GTSMI+LI+ +DQ++ +ML +E G ASNIKSRV RQ+V A+TS ++LKL NK PPNGLV++ G + +DG E Sbjct: 30 KGSGTSMITLIINFKDQINIHARMLAEEVGKASNIKSRVTRQNVTDALTSTLEKLKLYNKTPPNGLVIFCGLVQQEDGGE 109
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_TRYBB (Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma brucei brucei GN=ERF1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.227e-17 Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 RG GTS+IS+ M P++Q+S + L +E+GTASNIKS N+ SV AIT++ RLK N++PPNGL+LY GT+ T + KE Sbjct: 29 RGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIKSHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKE 108
BLAST of FC932376 vs. ExPASy Swiss-Prot
Match: ERF1_DILMA (Eukaryotic peptide chain release factor subunit 1 OS=Dileptus margaritifer GN=eRF1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.481e-17 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLDNKVPPNGLVLYTGTIGTDDGKE 448 +G+GTSMISLI+ +DQ++ KML DE G ASNIKSRV RQ+V A+TS ++LKL NK P NGL++Y G D E Sbjct: 30 KGSGTSMISLIINYKDQINPFMKMLVDEVGKASNIKSRVTRQNVTDALTSTMEKLKLYNKTPNNGLIIYCGLASEGDSGE 109 The following BLAST results are available for this feature:
BLAST of FC932376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932376 ID=FC932376; Name=FC932376; organism=Citrus clementina; type=EST; length=448bpback to top |