FC932377

Overview
NameFC932377
Unique NameFC932377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL1_RAT (Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus GN=Osbpl1a PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22
Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = 3
Query:  306 WKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVDFKLRNKFLGNSID 704
            W +++K IG ++ S +T+PV  +EP S LQR+ E ME+++L+  A    DP  R+   +++A+S +   + R  KPFNP+LGET+E+V    G   I+EQVSHHPP+SA HAE  N  FI+      + KF G S++
Sbjct:  550 WSILRKCIGMEL-SKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVE 685          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSH1_YEAST (Oxysterol-binding protein homolog 1 OS=Saccharomyces cerevisiae GN=OSH1 PE=1 SV=4)

HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21
Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = 3
Query:  234 EGSTEDAEDEARRGRWKQEE---RDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAWKPFNPVLGETFEMV-NHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVDFKLRNKFLGNS 698
            EGS    ED  R      E+   +   W +++  +G D+  L TLPV  +EP S+LQR++E +EYSH+LD A   ED  +R++Y +++  S+Y +   R  KPFNP+LGETFE     G   F  EQVSHHPP+SA   E+  + +  +  + + F G +
Sbjct:  774 EGSFVGYEDPVRTKLALDEDNRPKIGLWSVLKSMVGQDLTKL-TLPVSFNEPTSLLQRVSEDIEYSHILDQAATFEDSSLRMLYVAAFTASMYASTTNRVSKPFNPLLGETFEYARTDGQYRFFTEQVSHHPPISATWTESPKWDFYGECNVDSSFNGRT 932          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBP1_MOUSE (Oxysterol-binding protein 1 OS=Mus musculus GN=Osbp PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21
Identity = 60/153 (39.22%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  246 EDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIY-FAYRRAWKPFNPVLGETFEM--VNHGGVTFIAEQVSHHPPMSAGHAENEH-FIYDVDFKLRNKFLG 692
            E  +++  R  +K     N W +M+  IG ++ S + +PV  +EP S+LQR+ E +EY  LLD A +CE+   +L Y +++ +S Y     R  KPFNP+LGETFE+  +   G   I EQVSHHPP +A HAE+++ +    + K+ +KF G
Sbjct:  344 ETKKEKRTRIPYKPNYSLNLWSIMKNCIGKEL-SKIPMPVNFNEPLSMLQRLTEDLEYHELLDRAAKCENSLEQLCYVAAFTVSSYSTTVFRTSKPFNPLLGETFELDRLEENGYRSICEQVSHHPPAAAHHAESKNGWTLRQEIKITSKFRG 495          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBP1_RABIT (Oxysterol-binding protein 1 OS=Oryctolagus cuniculus GN=OSBP PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 59/153 (38.56%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  246 EDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIY-FAYRRAWKPFNPVLGETFEM--VNHGGVTFIAEQVSHHPPMSAGHAENEH-FIYDVDFKLRNKFLG 692
            E  +++  R  +K     N W +M+  IG ++ S + +PV  +EP S+LQR+ E +EY  LLD A +CE+   +L Y +++ +S Y     R  KPFNP+LGETFE+  +   G   + EQVSHHPP +A HAE+++ +    + K+ +KF G
Sbjct:  402 ETKKEKRTRIPYKPNYSLNLWSIMKNCIGKEL-SKIPMPVNFNEPLSMLQRLTEDLEYHELLDRAAKCENSLEQLCYVAAFTVSSYSTTVFRTSKPFNPLLGETFELDRLEENGYRSLCEQVSHHPPAAAHHAESKNGWTLRQEIKITSKFRG 553          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBP1_HUMAN (Oxysterol-binding protein 1 OS=Homo sapiens GN=OSBP PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 59/153 (38.56%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  246 EDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIY-FAYRRAWKPFNPVLGETFEM--VNHGGVTFIAEQVSHHPPMSAGHAENEH-FIYDVDFKLRNKFLG 692
            E  +++  R  +K     N W +M+  IG ++ S + +PV  +EP S+LQR+ E +EY  LLD A +CE+   +L Y +++ +S Y     R  KPFNP+LGETFE+  +   G   + EQVSHHPP +A HAE+++ +    + K+ +KF G
Sbjct:  400 ETKKEKRTRIPYKPNYSLNLWSIMKNCIGKEL-SKIPMPVNFNEPLSMLQRLTEDLEYHELLDRAAKCENSLEQLCYVAAFTVSSYSTTVFRTSKPFNPLLGETFELDRLEENGYRSLCEQVSHHPPAAAHHAESKNGWTLRQEIKITSKFRG 551          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSH2_YEAST (Oxysterol-binding protein homolog 2 OS=Saccharomyces cerevisiae GN=OSH2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 65/168 (38.69%), Postives = 95/168 (56.55%), Query Frame = 3
Query:  219 EVVNPEGSTEDAEDEARRGRWKQEERD----NYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAWKPFNPVLGETFEMVN-HGGVTFIAEQVSHHPPMSAGHAENEHFIYDVDFKLRNKFLGNSID 704
            E +  EGS    ED  R+ R   ++ D    + W +++  +G D+  + TLPV  +EP S+LQR+AE +EYS LLD A   ED  +R +Y +++  S Y +  +R  KPFNP+LGETFE         F  EQVSHHPP+SA   E+  + +  +  +  KF G S +
Sbjct:  867 EYLLKEGSYLGYEDGIRK-RLSMDKDDRPKISLWAVLKSMVGKDMTRM-TLPVTFNEPTSLLQRVAEDLEYSELLDQAATFEDSTLRTLYVAAFTASSYASTTKRVAKPFNPLLGETFEYSRPDKQYRFFTEQVSHHPPISATWTESPRWDFWGESFVDTKFNGRSFN 1032          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL2_HUMAN (Oxysterol-binding protein-related protein 2 OS=Homo sapiens GN=OSBPL2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 53/137 (38.69%), Postives = 86/137 (62.77%), Query Frame = 3
Query:  306 WKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVDFKLRNKFLGNSID 704
            W +++K +G ++ S +T+P+  +EP S LQR+ E ME+ +L+  A     P  R+   +++A+S +   + R  KPFNP+LGET+E++    G  FI+EQVSHHPP+SA H+E  N  F++      + KF G S++
Sbjct:   77 WTILKKCVGLEL-SKITMPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLERMQSVAAFAVSAVASQWERTGKPFNPLLGETYELIREDLGFRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVE 212          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL2_MOUSE (Oxysterol-binding protein-related protein 2 OS=Mus musculus GN=Osbpl2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 53/137 (38.69%), Postives = 86/137 (62.77%), Query Frame = 3
Query:  306 WKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVDFKLRNKFLGNSID 704
            W +++K IG ++ S +T+P+  +EP S LQR+ E ME+ +L+  A     P  R+   +++A+S +   + R  KPFNP+LGET+E++    G  FI+EQVSHHPP+SA ++E  N+ F +      + KF G S++
Sbjct:   77 WSILKKCIGLEL-SKITMPIAFNEPLSFLQRITEYMEHVYLIHKASSQSQPLERMQSVAAFAVSAVASQWERTGKPFNPLLGETYELIREDLGFRFISEQVSHHPPISAFYSEGLNQDFRFHGSIYPKLKFWGKSVE 212          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBP2_MOUSE (Oxysterol-binding protein 2 OS=Mus musculus GN=Osbp2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.217e-18
Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  300 NYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIY-FAYRRAWKPFNPVLGETFEM--VNHGGVTFIAEQVSHHPPMSAGHAENEH 647
            N W +M+  IG ++ S + +PV  +EP S+LQR+ E +EY HLLD A  C     ++   +++++S Y     R  KPFNP+LGETFE+  +   G+  + EQVSHHPP +A H  ++H
Sbjct:  519 NLWSIMKNCIGREL-SRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVNCTSSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLGETFELDRMEDMGLRSLCEQVSHHPPSAAHHVFSKH 636          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBP2_HUMAN (Oxysterol-binding protein 2 OS=Homo sapiens GN=OSBP2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17
Identity = 48/119 (40.34%), Postives = 75/119 (63.03%), Query Frame = 3
Query:  300 NYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIY-FAYRRAWKPFNPVLGETFEM--VNHGGVTFIAEQVSHHPPMSAGHAENEH 647
            N W +M+  IG ++ S + +PV  +EP S+LQR+ E +EY HLLD A  C     ++   +++++S Y     R  KPFNP+LGETFE+  ++  G+  + EQVSHHPP +A +  ++H
Sbjct:  522 NLWSIMKNCIGREL-SRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAVHCTSSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLGETFELDRLDDMGLRSLCEQVSHHPPSAAHYVFSKH 639          
The following BLAST results are available for this feature:
BLAST of FC932377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
OSBL1_RAT3.686e-2242.34Oxysterol-binding protein-related protein 1 OS=Rat... [more]
OSH1_YEAST1.401e-2138.75Oxysterol-binding protein homolog 1 OS=Saccharomyc... [more]
OSBP1_MOUSE3.120e-2139.22Oxysterol-binding protein 1 OS=Mus musculus GN=Osb... [more]
OSBP1_RABIT5.322e-2138.56Oxysterol-binding protein 1 OS=Oryctolagus cunicul... [more]
OSBP1_HUMAN5.322e-2138.56Oxysterol-binding protein 1 OS=Homo sapiens GN=OSB... [more]
OSH2_YEAST4.506e-2038.69Oxysterol-binding protein homolog 2 OS=Saccharomyc... [more]
OSBL2_HUMAN7.685e-2038.69Oxysterol-binding protein-related protein 2 OS=Hom... [more]
OSBL2_MOUSE1.311e-1938.69Oxysterol-binding protein-related protein 2 OS=Mus... [more]
OSBP2_MOUSE4.217e-1841.18Oxysterol-binding protein 2 OS=Mus musculus GN=Osb... [more]
OSBP2_HUMAN1.602e-1740.34Oxysterol-binding protein 2 OS=Homo sapiens GN=OSB... [more]

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Properties
Property NameValue
Genbank descriptionC34208A01EF PostHarveN Citrus clementina cDNA clone C34208A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932377 ID=FC932377; Name=FC932377; organism=Citrus clementina; type=EST; length=706bp
GAGGCGCCCCGATTAAAACGTCTCTCTCTCTATTCTTTCTAAGCTACGTA
TTCATTCGATAGCTGCGAGTATTTTCTCCTGAGATTGTTAATTGAGACAT
GACTTCCGATGGATCTAAGCAAGGCGGCGGTTTCTTCGCCTCCATCGCCG
CCGGTTGGTCGACTATCGGCTCCGCCATGAGTAAATCGGTCAACGGTTTA
TTGGGCTATGAAGGGCTGGAAGTTGTTAATCCTGAAGGGAGCACGGAAGA
TGCTGAAGATGAAGCAAGAAGAGGAAGATGGAAACAGGAGGAAAGGGACA
ATTACTGGAAGATGATGCAAAAGTATATAGGTGCTGATGTTCAATCGTTG
GTGACTCTTCCTGTATTTATTTCAGAGCCAAATTCAGTGCTGCAGAGAAT
GGCAGAGTTGATGGAGTACTCCCACCTTCTGGATCTGGCAGATGAATGCG
AGGATCCATACATGAGATTGGTATATGCTTCATCATGGGCTTTATCAATC
TACTTTGCCTATCGACGGGCCTGGAAGCCATTTAATCCAGTTCTTGGTGA
AACTTTTGAAATGGTTAATCATGGTGGTGTTACATTTATAGCTGAACAAG
TTAGTCATCACCCCCCAATGAGTGCTGGTCATGCCGAAAATGAGCACTTC
ATTTATGATGTNGACTTCAAGTTGAGAAACAAATTTTTAGGAAACTCGAT
TGATGT
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