FC932377

Overview
NameFC932377
Unique NameFC932377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: YEH1_SCHPO (Oxysterol-binding protein homolog C23H4.01c OS=Schizosaccharomyces pombe GN=SPAC23H4.01c PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 53/136 (38.97%), Postives = 87/136 (63.97%), Query Frame = 3
Query:  312 MMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIY----FAYRRAWKPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAENEHFIYDVDFKLRNKFLGNSID 704
            +++K IG D+ S +  PV  +EP ++LQR AE +EYS++LD A+EC+D  +++ Y +++A+S +       R   K F+P+LGETFE+V       F+AE+V H P + A HAE+ ++I++   K   KF G S++
Sbjct:  576 ILRKNIGKDISS-IPAPVVSNEPCNLLQRCAEDLEYSNMLDKANECDDD-IKIFYVAAFAVSNFSNMRHKERSVRKVFSPLLGETFELVREDRNYRFLAEKVCHRPLIIACHAESRNWIWNHSPKPIQKFWGKSVE 709          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL9_PONAB (Oxysterol-binding protein-related protein 9 OS=Pongo abelii GN=OSBPL9 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  240 STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF--------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVDFKLRNKFLGNSI 701
            S +D +D+A  G  ++ +      + Q  +G D+  +V LP FI E  S+L+  A+   +  L     + +DP  R+V    W LS + A R+   A KP+NP+LGE F              E+V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI
Sbjct:  355 SHDDRDDDAEAGSVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSISDQKDPKDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCYWTLPNDTEENTELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNAHIWTKSKFLGMSI 534          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL9_HUMAN (Oxysterol-binding protein-related protein 9 OS=Homo sapiens GN=OSBPL9 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  240 STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF--------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVDFKLRNKFLGNSI 701
            S +D +D+A  G  ++ +      + Q  +G D+  +V LP FI E  S+L+  A+   +  L     + +DP  R+V    W LS + A R+   A KP+NP+LGE F              E+V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI
Sbjct:  355 SHDDRDDDAEAGSVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSISDQKDPKDRMVQVVKWYLSAFHAGRKGSVAKKPYNPILGEIFQCHWTLPNDTEENTELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNAHIWTKSKFLGMSI 534          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL9_MOUSE (Oxysterol-binding protein-related protein 9 OS=Mus musculus GN=Osbpl9 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 62/181 (34.25%), Postives = 92/181 (50.83%), Query Frame = 3
Query:  240 STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF--------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVDFKLRNKFLGNSI 701
            S +D +D+   G  ++ +      + Q  +G D+  +V LP FI E  S+L+  A+   +  L     + +DP  R+V    W LS + A RR   A KP+NP+LGE F              E+V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI
Sbjct:  355 SHDDRDDDGEAGSVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSISDQKDPRDRMVQVVKWYLSAFHAGRRGSVAKKPYNPILGEIFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNAHIWTKSKFLGMSI 534          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL9_XENTR (Oxysterol-binding protein-related protein 9 OS=Xenopus tropicalis GN=osbpl9 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 62/182 (34.07%), Postives = 89/182 (48.90%), Query Frame = 3
Query:  243 TEDAEDEARRGRWKQEERDNYWKMM-QKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR---AWKPFNPVLGETF---------------EMVNHG--------GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVDFKLRNKFLGNSI 701
            T D  D+   G   +E +     ++ Q  +G D+  +V LP FI E  S+L+  A+   +  L     E +DP  R+     W LS + A R+   A KP+NP+LGE F               E V+ G         VTF+AEQVSHHPP+SA +AE  N+   ++     ++KFLG SI
Sbjct:  357 THDDRDDDGEGESVEEHKSVIMHLLSQVRLGMDLTKVV-LPTFILERRSLLEMYADFFAHPDLFVSIGEHKDPKDRMAQVVKWYLSAFHAGRKGSVAKKPYNPILGEVFQCHWALPGLENDENPEAVSEGPIPWASKNNVTFVAEQVSHHPPISAFYAECYNKRIQFNAHIWTKSKFLGMSI 537          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL8_HUMAN (Oxysterol-binding protein-related protein 8 OS=Homo sapiens GN=OSBPL8 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 3
Query:  285 QEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAW-KPFNPVLGETFEMV-----NHGGVTFIAEQVSHHPPMSAGHAEN--EHFIYDVDFKLRNKFLGNSI 701
            +E +   W ++++       S V LP FI EP S L ++++   ++  L  A   E+PY RL     W LS ++   +   KP+NP+LGETF  +      +    +IAEQVSHHPP+SA +  N  + F        ++KF GNS+
Sbjct:  401 EENKSLIWTLLKQVRPGMDLSKVVLPTFILEPRSFLDKLSDYYYHADFLSEAALEENPYFRLKKVVKWYLSGFYKKPKGLKKPYNPILGETFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSL 547          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL5_MOUSE (Oxysterol-binding protein-related protein 5 OS=Mus musculus GN=Osbpl5 PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 50/147 (34.01%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  285 QEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETFEM-----VNHGGVTFIAEQVSHHPPMSAGHAEN--EHFIYDVDFKLRNKFLGNSI 701
            +E +   W ++++       S V LP F+ EP S L ++++   +  LL  A   +DPY R+     W LS  Y   +   KP+NP+LGETF         +    +IAEQVSHHPP+SA +  N  + F        ++KF GNS+
Sbjct:  364 EENKSLMWVLLRQLRPGMDLSRVVLPTFVLEPRSFLGKLSDYYYHGDLLSRAAAEDDPYCRMKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRKDGFCMSGSITAKSKFYGNSL 510          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSBL5_HUMAN (Oxysterol-binding protein-related protein 5 OS=Homo sapiens GN=OSBPL5 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 50/147 (34.01%), Postives = 74/147 (50.34%), Query Frame = 3
Query:  285 QEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALS-IYFAYRRAWKPFNPVLGETFEMV-----NHGGVTFIAEQVSHHPPMSAGHAEN--EHFIYDVDFKLRNKFLGNSI 701
            +E +   W ++++       S V LP F+ EP S L ++++   ++ LL  A   ED Y R+     W LS  Y   +   KP+NP+LGETF              +IAEQVSHHPP+SA H  N  + F        +++F GNS+
Sbjct:  365 EENKSLMWTLLKQLRPGMDLSRVVLPTFVLEPRSFLNKLSDYYYHADLLSRAAVEEDAYSRMKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCCWFHPQTDSRTFYIAEQVSHHPPVSAFHVSNRKDGFCISGSITAKSRFYGNSL 511          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSH3_YEAST (Oxysterol-binding protein homolog 3 OS=Saccharomyces cerevisiae GN=OSH3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  315 MQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAY----RRAWKPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAENEHFIYDVDFKLRNKFLGNSID 704
            ++K +G D+ S + +PV  +EP S+LQ ++E  EY+ LL  A +  DP   + + S++A+S    Y    R   KPFNP+L ETFE++    G   I+E+VSH PP+ A  AE+  +          KF G SI+
Sbjct:  647 LRKNVGKDLSS-IAMPVTSNEPISILQLISETFEYAPLLTKATQRPDP---ITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEHLDWECSYTVTPSQKFWGKSIE 777          
BLAST of FC932377 vs. ExPASy Swiss-Prot
Match: OSB4_DICDI (Oxysterol-binding protein 4 OS=Dictyostelium discoideum GN=osbD PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 3
Query:  327 IGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR--AWKPFNPVLGETFE-----MVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVDFKL--RNKFLGNSI 701
            IG D+ S V LP FI EP S+L++  + M +  +L    + E P  R+   + W LS  F YR+    KP+NP+LGE F         +     +AEQ+SHHPP+S  +  N    Y +   +  R+KFLGNS+
Sbjct:   87 IGVDL-SRVPLPTFILEPRSLLEKFTDNMIHGEILCNLSKLESPMDRMHLITKWYLSA-FHYRKKGLQKPYNPILGEIFRTRWEFKETNSNCIMVAEQISHHPPVSCIYLSNRKDGYTMTGTINPRSKFLGNSM 218          
The following BLAST results are available for this feature:
BLAST of FC932377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
YEH1_SCHPO2.093e-1738.97Oxysterol-binding protein homolog C23H4.01c OS=Sch... [more]
OSBL9_PONAB3.570e-1734.25Oxysterol-binding protein-related protein 9 OS=Pon... [more]
OSBL9_HUMAN3.570e-1734.25Oxysterol-binding protein-related protein 9 OS=Hom... [more]
OSBL9_MOUSE4.662e-1734.25Oxysterol-binding protein-related protein 9 OS=Mus... [more]
OSBL9_XENTR8.793e-1634.07Oxysterol-binding protein-related protein 9 OS=Xen... [more]
OSBL8_HUMAN1.500e-1534.01Oxysterol-binding protein-related protein 8 OS=Hom... [more]
OSBL5_MOUSE2.558e-1534.01Oxysterol-binding protein-related protein 5 OS=Mus... [more]
OSBL5_HUMAN2.558e-1534.01Oxysterol-binding protein-related protein 5 OS=Hom... [more]
OSH3_YEAST3.694e-1437.04Oxysterol-binding protein homolog 3 OS=Saccharomyc... [more]
OSB4_DICDI1.404e-1337.31Oxysterol-binding protein 4 OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionC34208A01EF PostHarveN Citrus clementina cDNA clone C34208A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932377 ID=FC932377; Name=FC932377; organism=Citrus clementina; type=EST; length=706bp
GAGGCGCCCCGATTAAAACGTCTCTCTCTCTATTCTTTCTAAGCTACGTA
TTCATTCGATAGCTGCGAGTATTTTCTCCTGAGATTGTTAATTGAGACAT
GACTTCCGATGGATCTAAGCAAGGCGGCGGTTTCTTCGCCTCCATCGCCG
CCGGTTGGTCGACTATCGGCTCCGCCATGAGTAAATCGGTCAACGGTTTA
TTGGGCTATGAAGGGCTGGAAGTTGTTAATCCTGAAGGGAGCACGGAAGA
TGCTGAAGATGAAGCAAGAAGAGGAAGATGGAAACAGGAGGAAAGGGACA
ATTACTGGAAGATGATGCAAAAGTATATAGGTGCTGATGTTCAATCGTTG
GTGACTCTTCCTGTATTTATTTCAGAGCCAAATTCAGTGCTGCAGAGAAT
GGCAGAGTTGATGGAGTACTCCCACCTTCTGGATCTGGCAGATGAATGCG
AGGATCCATACATGAGATTGGTATATGCTTCATCATGGGCTTTATCAATC
TACTTTGCCTATCGACGGGCCTGGAAGCCATTTAATCCAGTTCTTGGTGA
AACTTTTGAAATGGTTAATCATGGTGGTGTTACATTTATAGCTGAACAAG
TTAGTCATCACCCCCCAATGAGTGCTGGTCATGCCGAAAATGAGCACTTC
ATTTATGATGTNGACTTCAAGTTGAGAAACAAATTTTTAGGAAACTCGAT
TGATGT
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