FC932384

Overview
NameFC932384
Unique NameFC932384
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOL5 (S-formylglutathione hydrolase frmB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmB PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 102/193 (52.85%), Postives = 131/193 (67.88%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAENE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPA--TARKSISGHSMGGLGALVLALRNPDEYASVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECO24 (S-formylglutathione hydrolase frmB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmB PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 102/193 (52.85%), Postives = 132/193 (68.39%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+ ++FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAANE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPA--TTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOUT (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain UTI89 / UPEC) GN=frmB PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.534e-52
Identity = 102/193 (52.85%), Postives = 131/193 (67.88%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAENE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPA--TARKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOK1 (S-formylglutathione hydrolase frmB OS=Escherichia coli O1:K1 / APEC GN=frmB PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.534e-52
Identity = 102/193 (52.85%), Postives = 131/193 (67.88%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAENE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPA--TARKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECO57 (S-formylglutathione hydrolase frmB OS=Escherichia coli O157:H7 GN=frmB PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.626e-51
Identity = 101/193 (52.33%), Postives = 131/193 (67.88%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSASLKCEMNVGVYLPPKAAGE-KLPVLYWLSGLTCNEQNFITKSGVQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMNHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOLI (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain K12) GN=frmB PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.054e-50
Identity = 99/187 (52.94%), Postives = 129/187 (68.98%), Query Frame = 2
Query:  128 FGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YL  NK
Sbjct:   10 FGGWQNMYRHYSQSLKCEMNVGVYLPPKAANE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECODH (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain K12 / DH10B) GN=frmB PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.054e-50
Identity = 99/187 (52.94%), Postives = 129/187 (68.98%), Query Frame = 2
Query:  128 FGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YL  NK
Sbjct:   10 FGGWQNMYRHYSQSLKCEMNVGVYLPPKAANE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOLC (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmB PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.377e-50
Identity = 100/193 (51.81%), Postives = 130/193 (67.36%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YL  NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAANE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOUT (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain UTI89 / UPEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.005e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALIQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOK1 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O1:K1 / APEC GN=yeiG PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.005e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALIQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDK 192          
The following BLAST results are available for this feature:
BLAST of FC932384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
SFGH1_ECOL57.300e-5252.85S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECO247.300e-5252.85S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECOUT9.534e-5252.85S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECOK19.534e-5252.85S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECO571.626e-5152.33S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECOLI1.054e-5052.94S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECODH1.054e-5052.94S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECOLC1.377e-5051.81S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH2_ECOUT4.005e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOK14.005e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionC34208A08EF PostHarveN Citrus clementina cDNA clone C34208A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932384 ID=FC932384; Name=FC932384; organism=Citrus clementina; type=EST; length=688bp
GAGTGACTCACTTCACTCTTTAATCTGCTGAAAGAACAAAGATCGTACAC
ACACAGGGAGAGCTCAACACAATCAATCACAGAGAAAAATGGAGACGAAG
CCGACAGAGATAAGCAGTTCTAAGATGTTCGGTGGATACAACAAAAGATT
CAAGCATTTCAGTACAACACTGGGCTGCTCCATGAATTTCCACATCTACT
TCCCTCCTTCTTCTTCTCCATCCTACAAATTCCCTGTGCTTTACTGGCTC
TCTGGTCTTACCTGCACTGATGAAAATTTTATAGCTAAGTCAGGAGCTCA
ACGTGCTGCTTCCGCTGAAGGTGTGGCTCTGATTGCCCCTGATACATCTC
CAAGAGGCCTGAATGTGGAAGGAGAGGCAGATAGCTGGGATTTTGGTGTA
GGTGCTGGATTTTATCTTAATGCTACACAGGAGAAGTGGAAGAACTGGCG
TATGTATGACTATGTTGTCAAGGAATTGCCCAAACTTCTGAGTGAAAATT
TTCCACAGCTTGAAACTTCTCGAGCATCCATATTTGGTCACTCAATGGGT
GGGCATGGTGCTTTGACAATCTATCTGAAAAATCTTGACAAGTATAAGTC
TGTATCTGCCTTTGCTCCAATTTGCAATCCTGTCAACTGTCCCTGGGGTC
AGAAGGCTTTTACATATTATCTTGGTAGTAACAAGCTG
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