FC932384

Overview
NameFC932384
Unique NameFC932384
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH2_ECO24 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.832e-50
Identity = 103/193 (53.37%), Postives = 127/193 (65.80%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTIKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOSM (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.923e-50
Identity = 103/187 (55.08%), Postives = 125/187 (66.84%), Query Frame = 2
Query:  128 FGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:   10 FEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSIPWGIKAFSRYLGEDK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH_HAEIN (S-formylglutathione hydrolase OS=Haemophilus influenzae GN=HI0184 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.391e-49
Identity = 97/193 (50.26%), Postives = 131/193 (67.88%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I   ++FGG  + + H + TL C M F +Y            V+YWLSGLTCT++NFI KSG QR A+   V ++APDTSPRG  V  +A ++D G GAGFYLNAT++ W  N++MYDY++ ELP L+  NFP     + SI GHSMGGHGAL + L+N ++Y+SVSAF+PI +P   PWG+KAF+ YLG ++
Sbjct:    4 IEQHQIFGGSQQVWAHNAQTLQCEMKFAVYLPNNPENR-PLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDA-AYDLGQGAGFYLNATEQPWATNYQMYDYILNELPDLIEANFPT--NGKRSIMGHSMGGHGALVLALRNRERYQSVSAFSPILSPSLVPWGEKAFSAYLGEDR 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH2_SHIDS (S-formylglutathione hydrolase yeiG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=yeiG PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.391e-49
Identity = 102/193 (52.85%), Postives = 125/193 (64.77%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V    D +D G  AGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K
Sbjct:    4 LEEHRCFQGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKV-ANGDGYDLGQSAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSRYLGEDK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH_PARDP (S-formylglutathione hydrolase OS=Paracoccus denitrificans (strain Pd 1222) GN=fghA PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43
Identity = 93/193 (48.19%), Postives = 125/193 (64.77%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +S ++ FGG    ++H S   G  M F IY         K PVL++LSGLTCT EN + K+GAQ  A+  G+A+I PDTSPRG  V  + +++D G GAGFY++AT+  W  ++RM+ YV  ELP+L+  NFP L+     I GHSMGGHGALTI +   ++Y+SVSAFAPI +P    WG+K F  YLG +K
Sbjct:    8 VSENRSFGGIQGVYRHQSQATGTPMTFAIYLPPDARHG-KVPVLWYLSGLTCTHENAMTKAGAQEWAAEYGIAVIFPDTSPRGEGVAND-ETYDLGQGAGFYVDATEAPWAPHFRMWHYVTHELPELVFNNFP-LDREAQGITGHSMGGHGALTIAMTFPERYRSVSAFAPIAHPSESDWGRKQFAAYLGDDK 197          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH_YEAST (S-formylglutathione hydrolase OS=Saccharomyces cerevisiae GN=YJL068C PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.579e-38
Identity = 92/200 (46.00%), Postives = 120/200 (60.00%), Query Frame = 2
Query:  131 GGYNKRFKHFSTTLGCSMNFHIY-----FXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEAD-SWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSR------ASIFGHSMGGHGALTIYLKNLD--KYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            GG   +  H S +   SMN +IY     +        + P +++LSGLTCT +N   K+  Q  A   G A++ PDTSPRG  V  + + SWDFG GAGFYLNATQE + ++++MYDY+ KELP+ L  +F +    +       +I GHSMGG+GA+  YLK     +YKS SAFAPI NP N PWGQKAF  YLG  K
Sbjct:   11 GGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEK 210          
The following BLAST results are available for this feature:
BLAST of FC932384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
SFGH2_ECO246.832e-5053.37S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOSM8.923e-5055.08S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH_HAEIN3.391e-4950.26S-formylglutathione hydrolase OS=Haemophilus influ... [more]
SFGH2_SHIDS3.391e-4952.85S-formylglutathione hydrolase yeiG OS=Shigella dys... [more]
SFGH_PARDP2.780e-4348.19S-formylglutathione hydrolase OS=Paracoccus denitr... [more]
SFGH_YEAST1.579e-3846.00S-formylglutathione hydrolase OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionC34208A08EF PostHarveN Citrus clementina cDNA clone C34208A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932384 ID=FC932384; Name=FC932384; organism=Citrus clementina; type=EST; length=688bp
GAGTGACTCACTTCACTCTTTAATCTGCTGAAAGAACAAAGATCGTACAC
ACACAGGGAGAGCTCAACACAATCAATCACAGAGAAAAATGGAGACGAAG
CCGACAGAGATAAGCAGTTCTAAGATGTTCGGTGGATACAACAAAAGATT
CAAGCATTTCAGTACAACACTGGGCTGCTCCATGAATTTCCACATCTACT
TCCCTCCTTCTTCTTCTCCATCCTACAAATTCCCTGTGCTTTACTGGCTC
TCTGGTCTTACCTGCACTGATGAAAATTTTATAGCTAAGTCAGGAGCTCA
ACGTGCTGCTTCCGCTGAAGGTGTGGCTCTGATTGCCCCTGATACATCTC
CAAGAGGCCTGAATGTGGAAGGAGAGGCAGATAGCTGGGATTTTGGTGTA
GGTGCTGGATTTTATCTTAATGCTACACAGGAGAAGTGGAAGAACTGGCG
TATGTATGACTATGTTGTCAAGGAATTGCCCAAACTTCTGAGTGAAAATT
TTCCACAGCTTGAAACTTCTCGAGCATCCATATTTGGTCACTCAATGGGT
GGGCATGGTGCTTTGACAATCTATCTGAAAAATCTTGACAAGTATAAGTC
TGTATCTGCCTTTGCTCCAATTTGCAATCCTGTCAACTGTCCCTGGGGTC
AGAAGGCTTTTACATATTATCTTGGTAGTAACAAGCTG
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