FC932385

Overview
NameFC932385
Unique NameFC932385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.515e-47
Identity = 96/234 (41.03%), Postives = 152/234 (64.96%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCI--LRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            + MI+ Y +  M  EA +LF EM  ++ D+ P++V++ +           EQGK IH  +   R  +DS+L  V  L+ MYA+CG++E    VF ++ K+ V +W +LIS Y  HG+G +AI  F EM   G+ P+ I+F +VL ACS+ GLVEEGK++F SM +++ ++P++EHY C+VDLLGRA  L+EA + I+++ ++P   +WG+LL +CRIH N+EL E   +  +++
Sbjct:  216 TTMISGYVQADMNKEALQLFHEM--QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV--LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445          

HSP 2 Score: 74.3294 bits (181), Expect = 7.397e-13
Identity = 54/232 (23.28%), Postives = 99/232 (42.67%), Query Frame = 3
Query:   69 REMIMESHDLCP----NSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNS-------------------------------LISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYAC-MVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656
            R +++    LC     N+ T  S+          E+   IH  I + G ++ +  V++L+  YA  G  +L   +FD + + D VSWNS                               +IS Y       +A+Q+F EM    V P  +S  + L AC+  G +E+GK +   + K  +   SV    C ++D+  +  ++EEA ++ ++++ +   + W +L+     H
Sbjct:   98 RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV--LGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAYH 326          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.590e-47
Identity = 94/227 (41.41%), Postives = 140/227 (61.67%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            ++++A Y +NG   EA  LFR+M+     + P +V   SV            GK +HG +LR G  S + + SALV MY++CG ++  + +FD M+  D VSW ++I  + +HG+G +A+ +F+EM   GV P+ ++FV+VL ACSH GLV+E    F SM K + +   +EHYA + DLLGRA KLEEA   I  + +EP   VW +LL SC +H N+ELAE+ ++
Sbjct:  312 NSLVAGYVQNGRYNEALRLFRQMVTAK--VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536          

HSP 2 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 63/199 (31.66%), Postives = 114/199 (57.29%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRI 605
            + +IA YA++GM  +A  + REM   + DL P+S T+ SV           +GK IHG ++R+G+DS + + S+LV MYA+  ++E  + VF  +  RD +SWNSL++ Y  +G   +A+++F++M+   V P  ++F SV+ AC+H   +  GK L   + +      ++   + +VD+  +   ++ A KI + + +
Sbjct:  211 NTIIAGYAQSGMYEDALRMVREM--GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF-GSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.830e-47
Identity = 92/233 (39.48%), Postives = 144/233 (61.80%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLS 707
            +AMI  +A+NG   +A   F +M   S  + P++ T VSV             K IHG ++R  LD  + V +ALV MYA+CG + + + +FD M +R V +WN++I  YG HG+G  A+++F+EM    + P+ ++F+SV+ ACSH+GLVE G   F  M++ + +  S++HY  MVDLLGRA +L EA   I  + ++P   V+G++LG+C+IH NV  AE+A++    L+
Sbjct:  407 NAMILGFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 637          

HSP 2 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 479
            + ++A Y++NGMA  A E+ + M  E+  L P+ +T+VSV            GK IHG  +R G DS++ + +ALV MYA+CG LE  + +FD M +R+VVSWNS+I +Y  +    +A+ IF++M+  GV P+ +S +  L AC+  G +E G+ +
Sbjct:  205 NTIVAGYSQNGMARMALEMVKSMCEEN--LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359          

HSP 3 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 56/232 (24.14%), Postives = 110/232 (47.41%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH----CNVELAERASKG 692
            ++MI  Y +N    EA  +F++M+ E   + P  V+++            E+G+ IH   +  GLD  + VV++L++MY +C +++    +F  +  R +VSWN++I  +  +G    A+  F +M    V P   ++VSV+ A +   +    K +   + +  + + +V     +VD+  +   +   A++I D+  E     W +++     H      +EL E   KG
Sbjct:  306 NSMIDAYVQNENPKEAMLIFQKMLDEG--VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK-NVFVTTALVDMYAKCGAI-MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG 533          

HSP 4 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 51/161 (31.68%), Postives = 87/161 (54.04%), Query Frame = 3
Query:  165 GKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLF-ESMRK--EHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638
            GK IHG +++ G    L  ++ L  MYA+C ++   + VFD M +RD+VSWN++++ Y  +G    A+++ K M    + PS I+ VSVL A S   L+  GK +   +MR   + +V  S      +VD+  +   LE A ++ + + +E     W S++
Sbjct:  154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS----TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMI 309          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.830e-47
Identity = 90/231 (38.96%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG-VSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +I  + RNG   EA +LF  ++M+   + P   T++S+            GK +H  ++R   D  + V S L+TMY +CG+L   + +FD    +D++ WNS+IS Y  HG G +A+++F EM   G   P+ ++FV+ L ACS+AG+VEEG  ++ESM     V+P   HYACMVD+LGRA +  EA ++I+ + +EP   VWGSLLG+CR H  +++AE  +K  + +
Sbjct:  302 VIKIHERNGFELEALDLF--ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.023e-46
Identity = 95/228 (41.67%), Postives = 142/228 (62.28%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHM-DKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            S MI   A NG   E+   FRE+  +   + PN V++  V          E GK++HG + + G   I+ V +AL+ MY+RCG + + + VF+ M +KR +VSW S+I+   +HG G +A+++F EM  +GV+P  ISF+S+L ACSHAGL+EEG+  F  M++ + + P +EHY CMVDL GR+ KL++A   I  + I P   VW +LLG+C  H N+ELAE+  +
Sbjct:  238 STMIVGIAHNGSFNESFLYFREL--QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.744e-46
Identity = 96/232 (41.38%), Postives = 142/232 (61.21%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            + +I  Y++N  A EA  LF  +++E     P+  T+  V          ++G+ IHG I+R G  S   V ++LV MYA+CG L L   +FD +  +D+VSW  +I+ YG+HG+G +AI +F +M   G+    ISFVS+L ACSH+GLV+EG   F  MR E  + P+VEHYAC+VD+L R   L +A + IE++ I P   +WG+LL  CRIH +V+LAE+ ++    L
Sbjct:  467 NTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697          

HSP 2 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 55/217 (25.35%), Postives = 112/217 (51.61%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHC 659
            +++I  Y  NG+A +   +F +M++   ++  +  T+VSV            G+ +H   ++          + L+ MY++CG L+  + VF  M  R VVS+ S+I+ Y   G  G+A+++F+EM   G+SP   +  +VL  C+   L++EGK + E + KE+ +   +     ++D+  +   ++EA  +  ++R++     W +++G    +C
Sbjct:  265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSKNC 477          

HSP 3 Score: 91.6633 bits (226), Expect = 4.477e-18
Identity = 58/199 (29.15%), Postives = 101/199 (50.75%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYA-CMVDLLGRANKLEEAAKIIEDL 599
            ++MIA YAR G+A EA +LF EM  E   + P+  T+ +V          ++GK +H  I    L   + V +AL+ MYA+CG ++  + VF  M  +D++SWN++I  Y  + Y  +A+ +F  ++     SP   +   VL AC+     ++G+ +   + +      S  H A  +VD+  +   L  A  + +D+
Sbjct:  366 TSMIAGYAREGLAGEAVKLFEEM--EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF--SDRHVANSLVDMYAKCGALLLAHMLFDDI 560          

HSP 4 Score: 75.485 bits (184), Expect = 3.320e-13
Identity = 49/192 (25.52%), Postives = 92/192 (47.92%), Query Frame = 3
Query:   30 ARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYAC--MVDLLGRANKLEEAAKIIEDL 599
            A++G    +  LF++M+    ++  +S T   V            G+ +HG IL+ G      V ++LV  Y +  +++  + VFD M +RDV+SWNS+I+ Y  +G   K + +F +M+  G+     + VSV   C+ + L+  G+ +     K    R   E   C  ++D+  +   L+ A  +  ++
Sbjct:  171 AKSGDFSGSIGLFKKMMSSGVEM--DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR---EDRFCNTLLDMYSKCGDLDSAKAVFREM 357          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.477e-45
Identity = 86/232 (37.07%), Postives = 149/232 (64.22%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            + +I+ YA++G A EA E+F+ M+ME+ +  P+ VT+++V          E G+ I   +  RG++  + + +A++ MYA+ G +     VF+ +++R+VV+W ++I+    HG+G +A+ +F  M+  GV P+ ++F+++L ACSH G V+ GK LF SMR ++ + P++EHY CM+DLLGRA KL EA ++I+ +  +    +WGSLL +  +H ++EL ERA    + L
Sbjct:  219 TCVISGYAKSGRASEAIEVFQRMLMENVE--PDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKL 448          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.929e-45
Identity = 92/226 (40.71%), Postives = 142/226 (62.83%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERAS 686
            +AMIA Y+++G +FEA  LF +M  E   L  N  +  S           E GK +HG +++ G ++   V +AL+ MY +CG +E    +F  M  +D+VSWN++I+ Y  HG+G  A++ F+ M   G+ P   + V+VL ACSH GLV++G+  F +M +++ V P+ +HYACMVDLLGRA  LE+A  +++++  EP   +WG+LLG+ R+H N ELAE A+
Sbjct:  378 AAMIAGYSQSGHSFEALRLFVQMEREGGRL--NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601          

HSP 2 Score: 70.4774 bits (171), Expect = 1.068e-11
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 479
            +AM++ Y +N M  EA ELF +M         N V+  ++          E  K +   +  R + +     + ++T YA+CGK+   + +FD M KRD VSW ++I+ Y   G+  +A+++F +M   G   +  SF S L  C+    +E GK L
Sbjct:  285 TAMVSGYIQNRMVEEARELFDKMPER------NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.519e-45
Identity = 92/232 (39.66%), Postives = 140/232 (60.34%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +A+I+ Y +NG   EA  +F E+ ++ + +  N +T+VS           E G+ IH  I + G+     V SAL+ MY++CG LE  + VF+ ++KRDV  W+++I    +HG G +A+ +F +M    V P+ ++F +V  ACSH GLV+E + LF  M   + + P  +HYAC+VD+LGR+  LE+A K IE + I P   VWG+LLG+C+IH N+ LAE A    L L
Sbjct:  333 NALISAYEQNGKPNEALIVFHELQLQKN-MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 563          

HSP 2 Score: 82.0333 bits (201), Expect = 3.547e-15
Identity = 58/222 (26.13%), Postives = 106/222 (47.75%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELA 674
            + +I  YA       +   F +M+ ES    PN  T   +            G+ +HG  ++  + S + V ++L+  Y  CG L+    VF  + ++DVVSWNS+I+ +   G   KA+++FK+M    V  S ++ V VL AC+    +E G+ +  S  +E+ V  ++     M+D+  +   +E+A ++ + +  E     W ++L    I  + E A
Sbjct:   99 NTLIRAYASGPDPVLSIWAFLDMVSESQ-CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAA 317          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR47_ARATH (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.296e-45
Identity = 92/213 (43.19%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   39 GMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAE 677
            G   ++ E FR+M  +   +  NSVT+  +            G+ IHG ++R  +   + V +ALV MYA+CG L  G  VF+ +  +D++SWNS+I  YG+HG+  KA+ +F  MI  G  P  I+ V+VL ACSHAGLVE+G+ +F SM K   + P  EHYAC+VDLLGR   L+EA++I++++ +EP   V G+LL SCR+H NV++AE
Sbjct:  413 GRGDDSLEYFRQM--QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAE 623          
The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
PP449_ARATH3.515e-4741.03Pentatricopeptide repeat-containing protein At5g66... [more]
PP251_ARATH4.590e-4741.41Putative pentatricopeptide repeat-containing prote... [more]
PPR32_ARATH7.830e-4739.48Pentatricopeptide repeat-containing protein At1g11... [more]
PPR25_ARATH7.830e-4738.96Pentatricopeptide repeat-containing protein At1g09... [more]
PP122_ARATH1.023e-4641.67Pentatricopeptide repeat-containing protein At1g74... [more]
PP320_ARATH1.744e-4641.38Pentatricopeptide repeat-containing protein At4g18... [more]
PP433_ARATH1.477e-4537.07Pentatricopeptide repeat-containing protein At5g56... [more]
PP301_ARATH1.929e-4540.71Pentatricopeptide repeat-containing protein At4g02... [more]
PP175_ARATH2.519e-4539.66Pentatricopeptide repeat-containing protein At2g29... [more]
PPR47_ARATH4.296e-4543.19Putative pentatricopeptide repeat-containing prote... [more]

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Properties
Property NameValue
Genbank descriptionC34208A09EF PostHarveN Citrus clementina cDNA clone C34208A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bp
GGCCGGGGAGTGCTATGATTGCTTGTTATGCTAGAAATGGGATGGCTTTT
GAGGCGTCGGAGCTTTTTCGTGAAATGATAATGGAGTCTCACGATTTATG
TCCGAATTCAGTGACTATGGTTAGTGTGCTTCAAGCTTGCGCGGCTCTTG
CTGCTTTAGAACAAGGGAAGATGATACATGGGTGCATATTAAGGAGGGGT
CTTGATTCTATTTTGCCTGTTGTAAGTGCATTGGTGACAATGTATGCGAG
ATGTGGAAAGCTTGAATTAGGTCAATGTGTTTTTGATCATATGGATAAGA
GGGATGTCGTTTCTTGGAATTCTTTAATTTCAAGCTATGGGGTTCATGGA
TATGGAGGGAAAGCAATTCAAATTTTTAAAGAGATGATTTATCATGGAGT
TTCACCGAGTCCTATATCTTTTGTTAGTGTTTTGGGAGCTTGCAGTCATG
CAGGGCTTGTTGAGGAGGGGAAGATGTTATTTGAATCTATGCGTAAAGAG
CATATGGTACGTCCTAGCGTGGAGCATTATGCTTGTATGGTAGATCTTCT
TGGTCGTGCTAATAAGTTAGAAGAAGCAGCCAAGATTATAGAAGATTTGA
GAATTGAACCGGGACCTAAGGTTTGGGGTTCATTGCTTGGATCGTGTCGG
ATTCATTGTAATGTTGAGCTTGCTGAGAGAGCAAGCAAAGGCTTTTTGAG
CTTGAGCCTACAATGCAGGGAATTATGTACTTC
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