FC932385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.515e-47 Identity = 96/234 (41.03%), Postives = 152/234 (64.96%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCI--LRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 + MI+ Y + M EA +LF EM ++ D+ P++V++ + EQGK IH + R +DS+L V L+ MYA+CG++E VF ++ K+ V +W +LIS Y HG+G +AI F EM G+ P+ I+F +VL ACS+ GLVEEGK++F SM +++ ++P++EHY C+VDLLGRA L+EA + I+++ ++P +WG+LL +CRIH N+EL E + +++ Sbjct: 216 TTMISGYVQADMNKEALQLFHEM--QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV--LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445 HSP 2 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 54/232 (23.28%), Postives = 99/232 (42.67%), Query Frame = 3 Query: 69 REMIMESHDLCP----NSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNS-------------------------------LISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYAC-MVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656 R +++ LC N+ T S+ E+ IH I + G ++ + V++L+ YA G +L +FD + + D VSWNS +IS Y +A+Q+F EM V P +S + L AC+ G +E+GK + + K + SV C ++D+ + ++EEA ++ ++++ + + W +L+ H Sbjct: 98 RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV--LGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAYH 326
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.590e-47 Identity = 94/227 (41.41%), Postives = 140/227 (61.67%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689 ++++A Y +NG EA LFR+M+ + P +V SV GK +HG +LR G S + + SALV MY++CG ++ + +FD M+ D VSW ++I + +HG+G +A+ +F+EM GV P+ ++FV+VL ACSH GLV+E F SM K + + +EHYA + DLLGRA KLEEA I + +EP VW +LL SC +H N+ELAE+ ++ Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAK--VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536 HSP 2 Score: 110.538 bits (275), Expect = 9.314e-24 Identity = 63/199 (31.66%), Postives = 114/199 (57.29%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRI 605 + +IA YA++GM +A + REM + DL P+S T+ SV +GK IHG ++R+G+DS + + S+LV MYA+ ++E + VF + RD +SWNSL++ Y +G +A+++F++M+ V P ++F SV+ AC+H + GK L + + ++ + +VD+ + ++ A KI + + + Sbjct: 211 NTIIAGYAQSGMYEDALRMVREM--GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF-GSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.830e-47 Identity = 92/233 (39.48%), Postives = 144/233 (61.80%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLS 707 +AMI +A+NG +A F +M S + P++ T VSV K IHG ++R LD + V +ALV MYA+CG + + + +FD M +R V +WN++I YG HG+G A+++F+EM + P+ ++F+SV+ ACSH+GLVE G F M++ + + S++HY MVDLLGRA +L EA I + ++P V+G++LG+C+IH NV AE+A++ L+ Sbjct: 407 NAMILGFAQNGRPIDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 637 HSP 2 Score: 112.849 bits (281), Expect = 1.877e-24 Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 479 + ++A Y++NGMA A E+ + M E+ L P+ +T+VSV GK IHG +R G DS++ + +ALV MYA+CG LE + +FD M +R+VVSWNS+I +Y + +A+ IF++M+ GV P+ +S + L AC+ G +E G+ + Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEEN--LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359 HSP 3 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 56/232 (24.14%), Postives = 110/232 (47.41%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH----CNVELAERASKG 692 ++MI Y +N EA +F++M+ E + P V+++ E+G+ IH + GLD + VV++L++MY +C +++ +F + R +VSWN++I + +G A+ F +M V P ++VSV+ A + + K + + + + + +V +VD+ + + A++I D+ E W +++ H +EL E KG Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEG--VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK-NVFVTTALVDMYAKCGAI-MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG 533 HSP 4 Score: 83.1889 bits (204), Expect = 1.592e-15 Identity = 51/161 (31.68%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 165 GKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLF-ESMRK--EHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 GK IHG +++ G L ++ L MYA+C ++ + VFD M +RD+VSWN++++ Y +G A+++ K M + PS I+ VSVL A S L+ GK + +MR + +V S +VD+ + LE A ++ + + +E W S++ Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS----TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMI 309
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 7.830e-47 Identity = 90/231 (38.96%), Postives = 140/231 (60.61%), Query Frame = 3 Query: 15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG-VSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +I + RNG EA +LF ++M+ + P T++S+ GK +H ++R D + V S L+TMY +CG+L + +FD +D++ WNS+IS Y HG G +A+++F EM G P+ ++FV+ L ACS+AG+VEEG ++ESM V+P HYACMVD+LGRA + EA ++I+ + +EP VWGSLLG+CR H +++AE +K + + Sbjct: 302 VIKIHERNGFELEALDLF--ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.023e-46 Identity = 95/228 (41.67%), Postives = 142/228 (62.28%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHM-DKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689 S MI A NG E+ FRE+ + + PN V++ V E GK++HG + + G I+ V +AL+ MY+RCG + + + VF+ M +KR +VSW S+I+ +HG G +A+++F EM +GV+P ISF+S+L ACSHAGL+EEG+ F M++ + + P +EHY CMVDL GR+ KL++A I + I P VW +LLG+C H N+ELAE+ + Sbjct: 238 STMIVGIAHNGSFNESFLYFREL--QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.744e-46 Identity = 96/232 (41.38%), Postives = 142/232 (61.21%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 + +I Y++N A EA LF +++E P+ T+ V ++G+ IHG I+R G S V ++LV MYA+CG L L +FD + +D+VSW +I+ YG+HG+G +AI +F +M G+ ISFVS+L ACSH+GLV+EG F MR E + P+VEHYAC+VD+L R L +A + IE++ I P +WG+LL CRIH +V+LAE+ ++ L Sbjct: 467 NTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697 HSP 2 Score: 94.3597 bits (233), Expect = 6.907e-19 Identity = 55/217 (25.35%), Postives = 112/217 (51.61%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHC 659 +++I Y NG+A + +F +M++ ++ + T+VSV G+ +H ++ + L+ MY++CG L+ + VF M R VVS+ S+I+ Y G G+A+++F+EM G+SP + +VL C+ L++EGK + E + KE+ + + ++D+ + ++EA + ++R++ W +++G +C Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSKNC 477 HSP 3 Score: 91.6633 bits (226), Expect = 4.477e-18 Identity = 58/199 (29.15%), Postives = 101/199 (50.75%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYA-CMVDLLGRANKLEEAAKIIEDL 599 ++MIA YAR G+A EA +LF EM E + P+ T+ +V ++GK +H I L + V +AL+ MYA+CG ++ + VF M +D++SWN++I Y + Y +A+ +F ++ SP + VL AC+ ++G+ + + + S H A +VD+ + L A + +D+ Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEM--EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF--SDRHVANSLVDMYAKCGALLLAHMLFDDI 560 HSP 4 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 49/192 (25.52%), Postives = 92/192 (47.92%), Query Frame = 3 Query: 30 ARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYAC--MVDLLGRANKLEEAAKIIEDL 599 A++G + LF++M+ ++ +S T V G+ +HG IL+ G V ++LV Y + +++ + VFD M +RDV+SWNS+I+ Y +G K + +F +M+ G+ + VSV C+ + L+ G+ + K R E C ++D+ + L+ A + ++ Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEM--DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR---EDRFCNTLLDMYSKCGDLDSAKAVFREM 357
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.477e-45 Identity = 86/232 (37.07%), Postives = 149/232 (64.22%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 + +I+ YA++G A EA E+F+ M+ME+ + P+ VT+++V E G+ I + RG++ + + +A++ MYA+ G + VF+ +++R+VV+W ++I+ HG+G +A+ +F M+ GV P+ ++F+++L ACSH G V+ GK LF SMR ++ + P++EHY CM+DLLGRA KL EA ++I+ + + +WGSLL + +H ++EL ERA + L Sbjct: 219 TCVISGYAKSGRASEAIEVFQRMLMENVE--PDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKL 448
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.929e-45 Identity = 92/226 (40.71%), Postives = 142/226 (62.83%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERAS 686 +AMIA Y+++G +FEA LF +M E L N + S E GK +HG +++ G ++ V +AL+ MY +CG +E +F M +D+VSWN++I+ Y HG+G A++ F+ M G+ P + V+VL ACSH GLV++G+ F +M +++ V P+ +HYACMVDLLGRA LE+A +++++ EP +WG+LLG+ R+H N ELAE A+ Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRL--NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601 HSP 2 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML 479 +AM++ Y +N M EA ELF +M N V+ ++ E K + + R + + + ++T YA+CGK+ + +FD M KRD VSW ++I+ Y G+ +A+++F +M G + SF S L C+ +E GK L Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPER------NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.519e-45 Identity = 92/232 (39.66%), Postives = 140/232 (60.34%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +A+I+ Y +NG EA +F E+ ++ + + N +T+VS E G+ IH I + G+ V SAL+ MY++CG LE + VF+ ++KRDV W+++I +HG G +A+ +F +M V P+ ++F +V ACSH GLV+E + LF M + + P +HYAC+VD+LGR+ LE+A K IE + I P VWG+LLG+C+IH N+ LAE A L L Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKN-MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 563 HSP 2 Score: 82.0333 bits (201), Expect = 3.547e-15 Identity = 58/222 (26.13%), Postives = 106/222 (47.75%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELA 674 + +I YA + F +M+ ES PN T + G+ +HG ++ + S + V ++L+ Y CG L+ VF + ++DVVSWNS+I+ + G KA+++FK+M V S ++ V VL AC+ +E G+ + S +E+ V ++ M+D+ + +E+A ++ + + E W ++L I + E A Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQ-CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAA 317
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR47_ARATH (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.296e-45 Identity = 92/213 (43.19%), Postives = 135/213 (63.38%), Query Frame = 3 Query: 39 GMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAE 677 G ++ E FR+M + + NSVT+ + G+ IHG ++R + + V +ALV MYA+CG L G VF+ + +D++SWNS+I YG+HG+ KA+ +F MI G P I+ V+VL ACSHAGLVE+G+ +F SM K + P EHYAC+VDLLGR L+EA++I++++ +EP V G+LL SCR+H NV++AE Sbjct: 413 GRGDDSLEYFRQM--QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAE 623 The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bpback to top |