FC932385

Overview
NameFC932385
Unique NameFC932385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.689e-41
Identity = 91/232 (39.22%), Postives = 140/232 (60.34%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +A+IA +AR     +A ELF+ M+ +     P+  +  S+          EQGK +H  +++ G   +    + L+ MYA+ G +   + +FD + KRDVVSWNSL+++Y  HG+G +A+  F+EM   G+ P+ ISF+SVL ACSH+GL++EG   +E M+K+ +V P   HY  +VDLLGRA  L  A + IE++ IEP   +W +LL +CR+H N EL   A++    L
Sbjct:  231 NALIAGHARRSGTEKALELFQGMLRDGFR--PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL 459          

HSP 2 Score: 97.0561 bits (240), Expect = 1.066e-19
Identity = 65/218 (29.82%), Postives = 112/218 (51.38%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK--EHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656
            + +I+ Y+++    +A   F +M+   +   PN  T+ SV            G  +HG  ++ G DS + V SAL+ +Y R G ++  Q VFD ++ R+ VSWN+LI+ +       KA+++F+ M+  G  PS  S+ S+ GACS  G +E+GK +   M K  E +V  +      ++D+  ++  + +A KI + L  +     W SLL +   H
Sbjct:  130 TTLISGYSQHDRPCDALLFFNQMLRFGYS--PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN---TLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQH 341          

HSP 3 Score: 68.1662 bits (165), Expect = 5.301e-11
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  162 QGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVL--------GACSH 449
            QG+++H  IL+      + + + L+ MYA+CG LE  + VF+ M +RD V+W +LIS Y  H     A+  F +M+  G SP+  +  SV+        G C H
Sbjct:   78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP229_ARATH (Pentatricopeptide repeat-containing protein At3g14330 OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.689e-41
Identity = 87/227 (38.33%), Postives = 137/227 (60.35%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            +++I+  ++     E   LFR+M  E      +  T+ ++            GK IH  IL+      +P++++L+ MY +CG++E  + VFD M  +D+ SWN +++ Y ++G   + I +F+ MI  GV+P  I+FV++L  CS  GL E G  LFE M+ E  V P++EHYAC+VD+LGRA K++EA K+IE +  +P   +WGSLL SCR+H NV + E A+K
Sbjct:  306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.207e-41
Identity = 92/233 (39.48%), Postives = 137/233 (58.80%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLS 707
            S+M++  A  GM  E   LFR M  E++ L      MVS             G  IHG +LR   +  + V ++LV MY +CG L+    +F  M+KR+ ++++++IS   +HG G  A+++F +MI  G+ P  + +VSVL ACSH+GLV+EG+ +F  M KE  V P+ EHY C+VDLLGRA  LEEA + I+ + IE    +W + L  CR+  N+EL + A++  L LS
Sbjct:  202 SSMVSARAGMGMWSECLLLFRGMCSETN-LKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLS 433          

HSP 2 Score: 74.3294 bits (181), Expect = 7.397e-13
Identity = 54/226 (23.89%), Postives = 107/226 (47.35%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELF-REMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYH-GVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAER 680
            + MI  Y  N M+FE +  F  EM+   ++  P++ T   +           +GK IHG + + GL++ + V ++L+ MY RCG++EL   VF+ ++ +   SW+S++S+    G   + + +F+ M     +       VS L AC++ G +  G M        ++   ++     +VD+  +   L++A  I + +  +     + +++    +H   E A R
Sbjct:  101 NTMIRGYV-NVMSFEEALCFYNEMMQRGNE--PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG-MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALR 321          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.207e-41
Identity = 85/225 (37.78%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG-VSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAER 680
            +++I  Y++NG A EA  +F +M+     + P+ VT +SV          + G+ IH  + + G      +V ALV MYA+ G  E  +  F+ ++K+D ++W  +I     HG+G +A+ IF+ M   G  +P  I+++ VL ACSH GLVEEG+  F  MR  H + P+VEHY CMVD+L RA + EEA ++++ + ++P   +WG+LL  C IH N+EL +R
Sbjct:  286 NSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDR 508          

HSP 2 Score: 90.5077 bits (223), Expect = 9.974e-18
Identity = 57/204 (27.94%), Postives = 100/204 (49.02%), Query Frame = 3
Query:   12 AMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILP--------VVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDL 599
            ++I+ +  N    +A E FREM  +S+ +  N   MV +            GK  HG +   G D            + ++L+ MYA+CG L   + +FD M +R +VSWNS+I+ Y  +G   +A+ +F +M+  G++P  ++F+SV+ A    G  + G+ +   + K   V+ +      +V++  +    E A K  EDL
Sbjct:  178 SLISGFVNNNRFSDAIEAFREM--QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAA-IVCALVNMYAKTGDAESAKKAFEDL 378          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.882e-41
Identity = 90/227 (39.65%), Postives = 138/227 (60.79%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            +AMI    RN    +A ELFREM ME+  +  N  T V V          E G+ +H  +  + ++    V +AL+ MY+RCG +   + VF  M  +DV+S+N++IS   +HG   +AI  F++M+  G  P+ ++ V++L ACSH GL++ G  +F SM++   V P +EHY C+VDLLGR  +LEEA + IE++ IEP   + G+LL +C+IH N+EL E+ +K
Sbjct:  224 TAMIDGLVRNKEMNKALELFREMQMEN--VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAK 448          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.882e-41
Identity = 88/228 (38.60%), Postives = 141/228 (61.84%), Query Frame = 3
Query:    9 SAMIACYARNG-MAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSI-LPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERAS 686
            + MI+ Y+ N  ++ EA + FR+M    H   P+  + V V           Q K IHG  ++  + S  + V +AL+++Y + G L+  + VFD M + + VS+N +I  Y  HG+G +A+ +++ M+  G++P+ I+FV+VL AC+H G V+EG+  F +M++   + P  EHY+CM+DLLGRA KLEEA + I+ +  +PG   W +LLG+CR H N+ LAERA+
Sbjct:  313 NTMISGYSMNEELSEEAVKSFRQMQRIGHR--PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAA 538          

HSP 2 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 56/183 (30.60%), Postives = 91/183 (49.73%), Query Frame = 3
Query:  168 KMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDK-RDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSH-----AGLVEEGKMLFESM-RKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGF 695
            K +H   +  G DS   V +A VT Y++ G L     VF  MD+ RD VSWNS+I +YG H  G KA+ ++KEMI+ G      +  SVL A +       G    GK++     +  H+    ++ Y+      G  + + ++ K+ +++ + P   VW +++    +  N EL+E A K F
Sbjct:  158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS----KCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSM--NEELSEEAVKSF 333          

HSP 3 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 48/199 (24.12%), Postives = 92/199 (46.23%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLE---LGQCVFDHMDKRDVVSWNSLISSYGVH-GYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIE 593
            ++MI  Y ++    +A  L++EMI +   +  +  T+ SV            G+  HG +++ G      V S L+  Y++CG  +     + VF  +   D+V WN++IS Y ++     +A++ F++M   G  P   SFV V  ACS+     + K +     K H+    +     ++ L  ++  L++A  + +
Sbjct:  209 NSMIVAYGQHKEGAKALALYKEMIFKGFKI--DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFD 405          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PPR52_ARATH (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.764e-41
Identity = 88/230 (38.26%), Postives = 141/230 (61.30%), Query Frame = 3
Query:   15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +IA Y +NG   EA ELFR+M  +     PNSVT++S+          +  + IHGC+LRR LD+I  V +AL   YA+ G +E  + +F  M+ +D+++WNSLI  Y +HG  G A+ +F +M   G++P+  +  S++ A    G V+EGK +F S+  ++ + P++EH + MV L GRAN+LEEA + I+++ I+    +W S L  CRIH ++++A  A++   SL
Sbjct:  495 IIAGYIQNGKKDEALELFRKM--QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL 722          

HSP 2 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 64/216 (29.63%), Postives = 112/216 (51.85%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDL---RIEPGPKVWGSLLGSC 647
            +AMI+    NGM ++A ++FR+M +    + PN+VT++S            QG  +H   ++ G    + V ++LV MY++CGKLE  + VFD +  +DV +WNS+I+ Y   GY GKA ++F  M    + P+ I++ +++      G   E   LF+ M K+  V+ +   +  ++    +  K +EA ++   +   R  P      SLL +C
Sbjct:  321 TAMISGLIHNGMRYQALDMFRKMFLAG--VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534          

HSP 3 Score: 91.2781 bits (225), Expect = 5.847e-18
Identity = 47/161 (29.19%), Postives = 88/161 (54.66%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESM 491
            SAMI  Y+R     E ++LFR M+ +   + P+      +          E GK+IH  +++ G+ S L V ++++ +YA+CG+L+     F  M +RDV++WNS++ +Y  +G   +A+++ KEM   G+SP  +++  ++G  +  G  +    L + M
Sbjct:  150 SAMIGAYSRENRWREVAKLFRLMMKDG--VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP232_ARATH (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.764e-41
Identity = 81/232 (34.91%), Postives = 138/232 (59.48%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            S++I  YA+ G   EA  LF+ +   +  +  +S  + S+           QGK +    ++        V++++V MY +CG ++  +  F  M  +DV+SW  +I+ YG HG G K+++IF EM+ H + P  + +++VL ACSH+G+++EG+ LF  + + H ++P VEHYAC+VDLLGRA +L+EA  +I+ + I+P   +W +LL  CR+H ++EL +   K  L +
Sbjct:  282 SSLILGYAQEGEFVEAMGLFKRLQELNSQI--DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511          

HSP 2 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 61/213 (28.64%), Postives = 102/213 (47.89%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISF--VSVLGACSHAGLVEEGKMLFESMRKEHMVRP-SVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638
            SA+++ +  NG    +  LF EM  +   + PN  T  +           E+G  IHG  L+ G + ++ V ++LV MY++CG++   + VF  +  R ++SWN++I+ +   GYG KA+  F  M    +   P  F   S+L ACS  G++  GK +   + +     P S      +VDL  +   L  A K  + ++ E     W SL+
Sbjct:   76 SALMSGHVLNGDLKGSLSLFSEMGRQG--IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285          

HSP 3 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 46/165 (27.88%), Postives = 81/165 (49.09%), Query Frame = 3
Query:  117 MVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEG--------KMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKI 587
            +VS+          +QG  +H  +L+ G    L   + L+ MY +C +  +   VFD M +R+VVSW++L+S + ++G    ++ +F EM   G+ P+  +F + L AC     +E+G        K+ FE M         VE    +VD+  +  ++ EA K+
Sbjct:    9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM---------VEVGNSLVDMYSKCGRINEAEKV 164          

HSP 4 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 50/203 (24.63%), Postives = 96/203 (47.29%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLD--SILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGK-MLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIE 608
            +AMIA +   G   +A + F  M   +    P+  T+ S+            GK IHG ++R G    S   +  +LV +Y +CG L   +  FD + ++ ++SW+SLI  Y   G   +A+ +FK +          +  S++G  +   L+ +GK M   +++    +  SV +   +VD+  +   ++EA K   +++++
Sbjct:  177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN--SVVDMYLKCGLVDEAEKCFAEMQLK 377          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.916e-41
Identity = 81/236 (34.32%), Postives = 145/236 (61.44%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMI-YHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713
            + MI  YA++G   +A  LF++++ E     P+ +T+V+           E G+ IH  +    +   + V + L+ MY++CG LE    VF+   ++D+V+WN++I+ Y +HGY   A+++F EM    G+ P+ I+F+  L AC+HAGLV EG  +FESM +E+ ++P +EHY C+V LLGRA +L+ A + I+++ ++    +W S+LGSC++H +  L +  ++  + L+++
Sbjct:  227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPK-PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK 461          

HSP 2 Score: 85.5001 bits (210), Expect = 3.208e-16
Identity = 62/229 (27.07%), Postives = 108/229 (47.16%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVS--------------------------------ALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHG-VSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIED 596
            +A I   + NG+  +A  L+ +++  S ++ PN  T  S+          + GK+IH  +L+ GL  I P V+                                A++T YA+ G +E  + +FD M +RD+VSWN +I  Y  HG+   A+ +F++++  G   P  I+ V+ L ACS  G +E G+ +   + K   +R +V+    ++D+  +   LEEA  +  D
Sbjct:   99 TAAINTASINGLKDQAFLLYVQLL--SSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGL-GIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.916e-41
Identity = 86/232 (37.07%), Postives = 136/232 (58.62%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +A+++ + ++G   EA  +F  M  E  D   N+ T  S           +QGK +H  I + G DS   V +AL++MYA+CG +   +  F  +  ++ VSWN++I++Y  HG+G +A+  F +MI+  V P+ ++ V VL ACSH GLV++G   FESM  E+ + P  EHY C+VD+L RA  L  A + I+++ I+P   VW +LL +C +H N+E+ E A+   L L
Sbjct:  661 NALVSGFQQSGNNEEALRVFVRMNREGID--NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 890          

HSP 2 Score: 85.8853 bits (211), Expect = 2.457e-16
Identity = 70/267 (26.22%), Postives = 119/267 (44.57%), Query Frame = 3
Query:   12 AMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKML--------FESMRK-------------------EHMVRPSVEH---YACMVDLLGRANKLEEAAKIIEDLRIE---PGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713
            AMI+  ++N    EA  LF +M +    + P      SV          E G+ +HG +L+ G  S   V +ALV++Y   G L   + +F +M +RD V++N+LI+     GYG KA+++FK M   G+ P   +  S++ ACS  G +  G+ L        F S  K                   ++ +   VE+   +  M+   G  + L  + +I   ++IE   P    + S+L +C    ++EL E+     +  + Q
Sbjct:  258 AMISGLSKNECEAEAIRLFCDMYVLG--IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522          

HSP 3 Score: 78.5666 bits (192), Expect = 3.922e-14
Identity = 55/225 (24.44%), Postives = 100/225 (44.44%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKV-WGSLLGSCRIHCNVELAER 680
            + M+  Y        +  +FR+M +E  ++ PN  T  S+          E G+ IH  I++        V S L+ MYA+ GKL+    +      +DVVSW ++I+ Y  + +  KA+  F++M+  G+    +   + + AC+    ++EG+ +  +          +     +V L  R  K+EE+    E  + E G  + W +L+   +   N E A R
Sbjct:  459 NVMLVAYGLLDDLRNSFRIFRQMQIE--EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE--QTEAGDNIAWNALVSGFQQSGNNEEALR 678          

HSP 4 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 44/163 (26.99%), Postives = 80/163 (49.08%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRK 497
            + MIA Y +     +A   FR+M+     +  + V + +           ++G+ IH      G  S LP  +ALVT+Y+RCGK+E     F+  +  D ++WN+L+S +   G   +A+++F  M   G+  +  +F S + A S    +++GK +   + K
Sbjct:  560 TTMIAGYTQYNFDDKALTTFRQML--DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720          
The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
PP252_ARATH1.689e-4139.22Pentatricopeptide repeat-containing protein At3g24... [more]
PP229_ARATH1.689e-4138.33Pentatricopeptide repeat-containing protein At3g14... [more]
PPR68_ARATH2.207e-4139.48Pentatricopeptide repeat-containing protein At1g31... [more]
PP214_ARATH2.207e-4137.78Putative pentatricopeptide repeat-containing prote... [more]
PP435_ARATH2.882e-4139.65Putative pentatricopeptide repeat-containing prote... [more]
PP274_ARATH2.882e-4138.60Pentatricopeptide repeat-containing protein At3g49... [more]
PPR52_ARATH3.764e-4138.26Pentatricopeptide repeat-containing protein At1g19... [more]
PP232_ARATH3.764e-4134.91Putative pentatricopeptide repeat-containing prote... [more]
PP354_ARATH4.916e-4134.32Pentatricopeptide repeat-containing protein At4g37... [more]
PP307_ARATH4.916e-4137.07Pentatricopeptide repeat-containing protein At4g13... [more]

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Properties
Property NameValue
Genbank descriptionC34208A09EF PostHarveN Citrus clementina cDNA clone C34208A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bp
GGCCGGGGAGTGCTATGATTGCTTGTTATGCTAGAAATGGGATGGCTTTT
GAGGCGTCGGAGCTTTTTCGTGAAATGATAATGGAGTCTCACGATTTATG
TCCGAATTCAGTGACTATGGTTAGTGTGCTTCAAGCTTGCGCGGCTCTTG
CTGCTTTAGAACAAGGGAAGATGATACATGGGTGCATATTAAGGAGGGGT
CTTGATTCTATTTTGCCTGTTGTAAGTGCATTGGTGACAATGTATGCGAG
ATGTGGAAAGCTTGAATTAGGTCAATGTGTTTTTGATCATATGGATAAGA
GGGATGTCGTTTCTTGGAATTCTTTAATTTCAAGCTATGGGGTTCATGGA
TATGGAGGGAAAGCAATTCAAATTTTTAAAGAGATGATTTATCATGGAGT
TTCACCGAGTCCTATATCTTTTGTTAGTGTTTTGGGAGCTTGCAGTCATG
CAGGGCTTGTTGAGGAGGGGAAGATGTTATTTGAATCTATGCGTAAAGAG
CATATGGTACGTCCTAGCGTGGAGCATTATGCTTGTATGGTAGATCTTCT
TGGTCGTGCTAATAAGTTAGAAGAAGCAGCCAAGATTATAGAAGATTTGA
GAATTGAACCGGGACCTAAGGTTTGGGGTTCATTGCTTGGATCGTGTCGG
ATTCATTGTAATGTTGAGCTTGCTGAGAGAGCAAGCAAAGGCTTTTTGAG
CTTGAGCCTACAATGCAGGGAATTATGTACTTC
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