FC932385

Overview
NameFC932385
Unique NameFC932385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41
Identity = 90/226 (39.82%), Postives = 139/226 (61.50%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERAS 686
            S M+  YA+ G   EA  LF+E + E+  L  N  +  SV          E G+ IHG  ++   DS   V S+LV++Y++CG  E    VF+ +  +++  WN+++ +Y  H +  K I++FK M   G+ P+ I+F++VL ACSHAGLV+EG+  F+ M KE  + P+ +HYA +VD+LGRA +L+EA ++I ++ I+P   VWG+LL SC +H N ELA  A+
Sbjct:  186 SGMMYGYAQMGENEEALWLFKEALFEN--LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAA 408          

HSP 2 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 53/220 (24.09%), Postives = 117/220 (53.18%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVE 668
            S++I+C+A+N + + + E  ++M+  + +L P+   + S           + G+ +H   ++ G D+ + V S+LV MYA+CG++   + +FD M +R+VV+W+ ++  Y   G   +A+ +FKE ++  ++ +  SF SV+  C+++ L+E G+ +     K      S    + +V L  +    E A ++  ++ ++    +W ++L +   H + +
Sbjct:   85 SSIISCFAQNELPWMSLEFLKKMM--AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG-SSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41
Identity = 94/227 (41.41%), Postives = 131/227 (57.71%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            ++M A Y +     EA  LF E+ +      P+  T  ++          + G+  H  +L+RGL+    + +AL+ MYA+CG  E     FD    RDVV WNS+ISSY  HG G KA+Q+ ++M+  G+ P+ I+FV VL ACSHAGLVE+G   FE M +   + P  EHY CMV LLGRA +L +A ++IE +  +P   VW SLL  C    NVELAE A++
Sbjct:  524 NSMFAGYVQQSENEEALNLFLELQLSRER--PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747          

HSP 2 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 43/195 (22.05%), Postives = 98/195 (50.26%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIE 593
            + MI+   + G ++ + +LF +++ ++  + P+   + +V          E GK IH  ILR GL+    +++ L+  Y +CG++     +F+ M  ++++SW +L+S Y  +    +A+++F  M   G+ P   +  S+L +C+    +  G  +     K ++   S    + ++D+  + + L +A K+ +
Sbjct:  218 TTMISGCVKMGRSYVSLQLFYQLMEDN--VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS-LIDMYAKCDCLTDARKVFD 409          

HSP 3 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 56/220 (25.45%), Postives = 100/220 (45.45%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASE---LFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHM-VRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656
            +AMI  Y+R G  +E  E   +FR+M      + P+ +T VS+             K IHG + + GL+  +   SAL+ +Y+ C  L+  + VFD M  +D+V WNS+ + Y       +A+ +F E+      P   +F +++ A  +   V+ G+     + K  +   P + +   ++D+  +    E+A K   D         W S++ S   H
Sbjct:  420 NAMIEGYSRLGTQWELHEALNIFRDMRFRL--IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANH 634          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41
Identity = 78/214 (36.45%), Postives = 129/214 (60.28%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCR 650
            +A+I+ + ++G   EA  +F EM  E  D+  + + + S+            G+ +HG ++  G DS + + +AL+ MYA+C  +   + +F  M  RDVVSW SLI     HG   KA+ ++ +M+ HGV P+ ++FV ++ ACSH G VE+G+ LF+SM K++ +RPS++HY C++DLLGR+  L+EA  +I  +   P    W +LL +C+
Sbjct:  206 TALISGFVQSGKGLEAFSVFTEMRRERVDIL-DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK 418          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.385e-41
Identity = 89/237 (37.55%), Postives = 140/237 (59.07%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMI-YHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQC 716
            +AMI+ +A+        +L+ +M   + D  PN  T  ++           QG+ +H   L  GL S L + ++L++MY +CG L+    +FD    +DVVSWNS+I+ Y  HG   +AI++F+ M+   G  P  I+++ VL +C HAGLV+EG+  F  M  EH ++P + HY+C+VDLLGR   L+EA ++IE++ ++P   +WGSLL SCR+H +V    RA++  L L   C
Sbjct:  190 TAMISGFAQEWRVDICLKLYSKMRKSTSD--PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDC 423          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.095e-40
Identity = 87/224 (38.84%), Postives = 133/224 (59.38%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAER 680
            S MI  YA+N    +A +LF    M+   +  N   MVSV          E G+  +  +++  +   L + +ALV M+ RCG +E    VF+ + + D +SW+S+I    VHG+  KA+  F +MI  G  P  ++F +VL ACSH GLVE+G  ++E+M+K+H + P +EHY C+VD+LGRA KL EA   I  + ++P   + G+LLG+C+I+ N E+AER
Sbjct:  218 SIMINGYAKNNCFEKAIDLFE--FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439          

HSP 2 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 66/268 (24.63%), Postives = 114/268 (42.54%), Query Frame = 3
Query:   15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYG--------------------------VHGYGG-----KAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQCREL 725
            +I C++      +A   + +M+     + P+++T   +            G+  H  I+R G  + + V ++LV MYA CG +     +F  M  RDVVSW S+++ Y                           ++GY       KAI +F+ M   GV  +    VSV+ +C+H G +E G+  +E + K HM    +   A +VD+  R   +E+A  + E L  E     W S++    +H +   A       +SL    R++
Sbjct:   88 LIRCFSTGAEPSKAFGFYTQMLKSR--IWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.095e-40
Identity = 86/227 (37.89%), Postives = 138/227 (60.79%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689
            ++MI+ + RNG   +A ++FREM  +  D+ P+  TMVS+          EQG+ IH  I+R   +    VV+AL+ MY +CG +E G  VF+   K+ +  WNS+I     +G+  +A+ +F E+   G+ P  +SF+ VL AC+H+G V      F  M++++M+ PS++HY  MV++LG A  LEEA  +I+++ +E    +W SLL +CR   NVE+A+RA+K
Sbjct:  227 NSMISGFVRNGRFKDALDMFREM--QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451          

HSP 2 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 53/226 (23.45%), Postives = 101/226 (44.69%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMY-------------------------------ARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIE 593
            + +I  ++R+     A  +F +M+  S  + P  +T  SV            G+ +HG +++ GL+    + + ++ MY                               A+CG ++  Q +FD M +R+ VSWNS+IS +  +G    A+ +F+EM    V P   + VS+L AC++ G  E+G+ + E + +      S+     ++D+  +   +EE   + E
Sbjct:   93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV-VTALIDMYCKCGCIEEGLNVFE 317          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP337_ARATH (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.430e-40
Identity = 86/233 (36.91%), Postives = 143/233 (61.37%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEA-AKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            ++M+  Y  +G+  EA ++FR M+    +  P+ V + SV          + G+ +HG ++RRG++  L V +AL+ +Y++ G+L     +FD M +RD VSWN++IS+   H      ++ F++M      P  I+FVSVL  C++ G+VE+G+ LF  M KE+ + P +EHYACMV+L GRA  +EEA + I++++ +E GP VWG+LL +C +H N ++ E A++    L
Sbjct:  265 NSMLTGYLHHGLLHEALDIFRLMVQNGIE--PDKVAISSVLARVLSF---KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL 489          

HSP 2 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 44/142 (30.99%), Postives = 78/142 (54.93%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVL 434
            +++I+ YA  G   +A  L+ +M  +   + P+  T   V          + G+ IH  +++ G    + V++ALV MYA+CG +   + VFD +  +D VSWNS+++ Y  HG   +A+ IF+ M+ +G+ P  ++  SVL
Sbjct:  164 NSLISGYAELGQYEDAMALYFQMAEDG--VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303          

HSP 3 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 3
Query:  159 EQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDV--VSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKE 500
            + G  +H  I    L + L + S LV +YA CG  E+   VFD M KRD    +WNSLIS Y   G    A+ ++ +M   GV P   +F  VL AC   G V+ G+ +   + KE
Sbjct:  109 DHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40
Identity = 88/232 (37.93%), Postives = 139/232 (59.91%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +AMI+ YA+ G + EA  +F  M +E   +  N V M+SV          +QG+  H  I R  +   + + + LV +YA+CG +E    VF  M++++V +W+S ++   ++G+G K +++F  M   GV+P+ ++FVSVL  CS  G V+EG+  F+SMR E  + P +EHY C+VDL  RA +LE+A  II+ + ++P   VW SLL + R++ N+EL   ASK  L L
Sbjct:  209 NAMISGYAQVGESREALNVFHLMQLEGVKV--NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438          

HSP 2 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 55/241 (22.82%), Postives = 112/241 (46.47%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYA-------------------------------RCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638
            ++MI  + ++ +  ++ + +R ++   +DL P++ T+  +          E G  +HG  +RRG D+   V + L+++YA                               RCG +   + +F+ M +RD ++WN++IS Y   G   +A+ +F  M   GV  + ++ +SVL AC+  G +++G+    S  + + ++ +V     +VDL  +   +E+A ++   +  E     W S L
Sbjct:   75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA-HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSAL 313          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP329_ARATH (Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40
Identity = 86/235 (36.60%), Postives = 137/235 (58.30%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713
            ++MI+ +  N +  +A  LFR M  ++  LCPN  +  +V            G+  HG +++ G  S   V +AL  MY +CG+++  +  FD + +++ V WN +I  YG +G G +A+ ++++MI  G  P  I+FVSVL ACSH+GLVE G  +  SM++ H + P ++HY C+VD LGRA +LE+A K+ E    +    +W  LL SCR+H +V LA R ++  + L  Q
Sbjct:  487 NSMISGFRHNMLDTKALILFRRM-HQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQ 720          

HSP 2 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 55/212 (25.94%), Postives = 103/212 (48.58%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDH-MDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGV-SPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638
            +AM++ Y+      EA   FR+M  +  +L P+  T+  +          E GK IHG ++R  +     +VS L+ +Y+ C K+E+ +C+FD  +++ D+  WNS+IS +  +    KA+ +F+ M    V  P+  SF +VL +CS    +  G+     + K   V  S    A + D+  +  +++ A +   D  +     +W  ++
Sbjct:  385 NAMLSGYSNYEHYEEAISNFRQM--QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFF-DAVLRKNTVIWNEMI 592          

HSP 3 Score: 81.2629 bits (199), Expect = 6.051e-15
Identity = 59/223 (26.46%), Postives = 102/223 (45.74%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMI---MESHDLCPNSVTMVSVXXXXXXXXXX----EQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLR---IEPGPKVWGSLLGSC 647
            +A+I   AR     EA ++FR M    ++   +C +++  +S               E GK IH   LR G    L + ++L+ +YA+   +   + +F  M + +VVSWN +I  +G      K+++    M   G  P+ ++ +SVLGAC  +G VE G+ +F S     + +PSV  +  M+         EEA      ++   ++P       +L SC
Sbjct:  209 TAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS-----IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426          
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40
Identity = 90/232 (38.79%), Postives = 138/232 (59.48%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704
            +++I  +A+N  +  A ELF+ M  +         T+ SV          E G   H  I++   D IL   +ALV MY +CG LE    VF+ M +RDV++W+++IS    +GY  +A+++F+ M   G  P+ I+ V VL ACSHAGL+E+G   F SM+K + + P  EHY CM+DLLG+A KL++A K++ ++  EP    W +LLG+CR+  N+ LAE A+K  ++L
Sbjct:  229 NSIIGGFAQNSRSDVALELFKRM--KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456          

HSP 2 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 56/212 (26.42%), Postives = 101/212 (47.64%), Query Frame = 3
Query:    9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYA--CMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638
            + MI+ Y++  +  +A EL   ++M   ++ PN  T  SV             +M+H  I++ GL+S + V SAL+ ++A+ G+ E    VFD M   D + WNS+I  +  +     A+++FK M   G      +  SVL AC+   L+E G          H+V+   +      +VD+  +   LE+A ++   ++ E     W +++
Sbjct:  131 TTMISAYSKCKIHQKALELL--VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG-----MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMI 331          

HSP 3 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 51/220 (23.18%), Postives = 105/220 (47.73%), Query Frame = 3
Query:   81 MESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACS--------HAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG----SCRIHCNVELAERASK-GFLS 701
            ++SH L  +S T   +           +G +I   +   G   ++ +V+ L+ MY +   L     +FD M +R+V+SW ++IS+Y       KA+++   M+   V P+  ++ SVL +C+        H G+++EG      +  +  VR      + ++D+  +  + E+A  + +++ +     VW S++G    + R    +EL +R  + GF++
Sbjct:   52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG------LESDVFVR------SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258          
The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
PP429_ARATH6.420e-4139.82Putative pentatricopeptide repeat-containing prote... [more]
PP357_ARATH6.420e-4141.41Pentatricopeptide repeat-containing protein At4g39... [more]
PP308_ARATH6.420e-4136.45Pentatricopeptide repeat-containing protein At4g14... [more]
PP192_ARATH8.385e-4137.55Pentatricopeptide repeat-containing protein At2g37... [more]
PP367_ARATH1.095e-4038.84Pentatricopeptide repeat-containing protein At5g06... [more]
PP200_ARATH1.095e-4037.89Pentatricopeptide repeat-containing protein At2g42... [more]
PP337_ARATH1.430e-4036.91Pentatricopeptide repeat-containing protein At4g25... [more]
PP410_ARATH1.868e-4037.93Putative pentatricopeptide repeat-containing prote... [more]
PP329_ARATH1.868e-4036.60Pentatricopeptide repeat-containing protein At4g20... [more]
PP147_ARATH1.868e-4038.79Pentatricopeptide repeat-containing protein At2g03... [more]

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Properties
Property NameValue
Genbank descriptionC34208A09EF PostHarveN Citrus clementina cDNA clone C34208A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bp
GGCCGGGGAGTGCTATGATTGCTTGTTATGCTAGAAATGGGATGGCTTTT
GAGGCGTCGGAGCTTTTTCGTGAAATGATAATGGAGTCTCACGATTTATG
TCCGAATTCAGTGACTATGGTTAGTGTGCTTCAAGCTTGCGCGGCTCTTG
CTGCTTTAGAACAAGGGAAGATGATACATGGGTGCATATTAAGGAGGGGT
CTTGATTCTATTTTGCCTGTTGTAAGTGCATTGGTGACAATGTATGCGAG
ATGTGGAAAGCTTGAATTAGGTCAATGTGTTTTTGATCATATGGATAAGA
GGGATGTCGTTTCTTGGAATTCTTTAATTTCAAGCTATGGGGTTCATGGA
TATGGAGGGAAAGCAATTCAAATTTTTAAAGAGATGATTTATCATGGAGT
TTCACCGAGTCCTATATCTTTTGTTAGTGTTTTGGGAGCTTGCAGTCATG
CAGGGCTTGTTGAGGAGGGGAAGATGTTATTTGAATCTATGCGTAAAGAG
CATATGGTACGTCCTAGCGTGGAGCATTATGCTTGTATGGTAGATCTTCT
TGGTCGTGCTAATAAGTTAGAAGAAGCAGCCAAGATTATAGAAGATTTGA
GAATTGAACCGGGACCTAAGGTTTGGGGTTCATTGCTTGGATCGTGTCGG
ATTCATTGTAATGTTGAGCTTGCTGAGAGAGCAAGCAAAGGCTTTTTGAG
CTTGAGCCTACAATGCAGGGAATTATGTACTTC
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