FC932385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41 Identity = 90/226 (39.82%), Postives = 139/226 (61.50%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERAS 686 S M+ YA+ G EA LF+E + E+ L N + SV E G+ IHG ++ DS V S+LV++Y++CG E VF+ + +++ WN+++ +Y H + K I++FK M G+ P+ I+F++VL ACSHAGLV+EG+ F+ M KE + P+ +HYA +VD+LGRA +L+EA ++I ++ I+P VWG+LL SC +H N ELA A+ Sbjct: 186 SGMMYGYAQMGENEEALWLFKEALFEN--LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAA 408 HSP 2 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 53/220 (24.09%), Postives = 117/220 (53.18%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVE 668 S++I+C+A+N + + + E ++M+ + +L P+ + S + G+ +H ++ G D+ + V S+LV MYA+CG++ + +FD M +R+VV+W+ ++ Y G +A+ +FKE ++ ++ + SF SV+ C+++ L+E G+ + K S + +V L + E A ++ ++ ++ +W ++L + H + + Sbjct: 85 SSIISCFAQNELPWMSLEFLKKMM--AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG-SSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41 Identity = 94/227 (41.41%), Postives = 131/227 (57.71%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689 ++M A Y + EA LF E+ + P+ T ++ + G+ H +L+RGL+ + +AL+ MYA+CG E FD RDVV WNS+ISSY HG G KA+Q+ ++M+ G+ P+ I+FV VL ACSHAGLVE+G FE M + + P EHY CMV LLGRA +L +A ++IE + +P VW SLL C NVELAE A++ Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRER--PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747 HSP 2 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 43/195 (22.05%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIE 593 + MI+ + G ++ + +LF +++ ++ + P+ + +V E GK IH ILR GL+ +++ L+ Y +CG++ +F+ M ++++SW +L+S Y + +A+++F M G+ P + S+L +C+ + G + K ++ S + ++D+ + + L +A K+ + Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDN--VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS-LIDMYAKCDCLTDARKVFD 409 HSP 3 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 56/220 (25.45%), Postives = 100/220 (45.45%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASE---LFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHM-VRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 656 +AMI Y+R G +E E +FR+M + P+ +T VS+ K IHG + + GL+ + SAL+ +Y+ C L+ + VFD M +D+V WNS+ + Y +A+ +F E+ P +F +++ A + V+ G+ + K + P + + ++D+ + E+A K D W S++ S H Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRL--IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANH 634
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41 Identity = 78/214 (36.45%), Postives = 129/214 (60.28%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCR 650 +A+I+ + ++G EA +F EM E D+ + + + S+ G+ +HG ++ G DS + + +AL+ MYA+C + + +F M RDVVSW SLI HG KA+ ++ +M+ HGV P+ ++FV ++ ACSH G VE+G+ LF+SM K++ +RPS++HY C++DLLGR+ L+EA +I + P W +LL +C+ Sbjct: 206 TALISGFVQSGKGLEAFSVFTEMRRERVDIL-DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK 418
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.385e-41 Identity = 89/237 (37.55%), Postives = 140/237 (59.07%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMI-YHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQC 716 +AMI+ +A+ +L+ +M + D PN T ++ QG+ +H L GL S L + ++L++MY +CG L+ +FD +DVVSWNS+I+ Y HG +AI++F+ M+ G P I+++ VL +C HAGLV+EG+ F M EH ++P + HY+C+VDLLGR L+EA ++IE++ ++P +WGSLL SCR+H +V RA++ L L C Sbjct: 190 TAMISGFAQEWRVDICLKLYSKMRKSTSD--PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDC 423
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.095e-40 Identity = 87/224 (38.84%), Postives = 133/224 (59.38%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAER 680 S MI YA+N +A +LF M+ + N MVSV E G+ + +++ + L + +ALV M+ RCG +E VF+ + + D +SW+S+I VHG+ KA+ F +MI G P ++F +VL ACSH GLVE+G ++E+M+K+H + P +EHY C+VD+LGRA KL EA I + ++P + G+LLG+C+I+ N E+AER Sbjct: 218 SIMINGYAKNNCFEKAIDLFE--FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439 HSP 2 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 66/268 (24.63%), Postives = 114/268 (42.54%), Query Frame = 3 Query: 15 MIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYG--------------------------VHGYGG-----KAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQCREL 725 +I C++ +A + +M+ + P+++T + G+ H I+R G + + V ++LV MYA CG + +F M RDVVSW S+++ Y ++GY KAI +F+ M GV + VSV+ +C+H G +E G+ +E + K HM + A +VD+ R +E+A + E L E W S++ +H + A +SL R++ Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSR--IWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.095e-40 Identity = 86/227 (37.89%), Postives = 138/227 (60.79%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASK 689 ++MI+ + RNG +A ++FREM + D+ P+ TMVS+ EQG+ IH I+R + VV+AL+ MY +CG +E G VF+ K+ + WNS+I +G+ +A+ +F E+ G+ P +SF+ VL AC+H+G V F M++++M+ PS++HY MV++LG A LEEA +I+++ +E +W SLL +CR NVE+A+RA+K Sbjct: 227 NSMISGFVRNGRFKDALDMFREM--QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451 HSP 2 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 53/226 (23.45%), Postives = 101/226 (44.69%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMY-------------------------------ARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIE 593 + +I ++R+ A +F +M+ S + P +T SV G+ +HG +++ GL+ + + ++ MY A+CG ++ Q +FD M +R+ VSWNS+IS + +G A+ +F+EM V P + VS+L AC++ G E+G+ + E + + S+ ++D+ + +EE + E Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV-VTALIDMYCKCGCIEEGLNVFE 317
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP337_ARATH (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.430e-40 Identity = 86/233 (36.91%), Postives = 143/233 (61.37%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEA-AKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 ++M+ Y +G+ EA ++FR M+ + P+ V + SV + G+ +HG ++RRG++ L V +AL+ +Y++ G+L +FD M +RD VSWN++IS+ H ++ F++M P I+FVSVL C++ G+VE+G+ LF M KE+ + P +EHYACMV+L GRA +EEA + I++++ +E GP VWG+LL +C +H N ++ E A++ L Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQNGIE--PDKVAISSVLARVLSF---KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL 489 HSP 2 Score: 78.1814 bits (191), Expect = 5.122e-14 Identity = 44/142 (30.99%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVL 434 +++I+ YA G +A L+ +M + + P+ T V + G+ IH +++ G + V++ALV MYA+CG + + VFD + +D VSWNS+++ Y HG +A+ IF+ M+ +G+ P ++ SVL Sbjct: 164 NSLISGYAELGQYEDAMALYFQMAEDG--VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303 HSP 3 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 159 EQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDV--VSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKE 500 + G +H I L + L + S LV +YA CG E+ VFD M KRD +WNSLIS Y G A+ ++ +M GV P +F VL AC G V+ G+ + + KE Sbjct: 109 DHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40 Identity = 88/232 (37.93%), Postives = 139/232 (59.91%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +AMI+ YA+ G + EA +F M +E + N V M+SV +QG+ H I R + + + + LV +YA+CG +E VF M++++V +W+S ++ ++G+G K +++F M GV+P+ ++FVSVL CS G V+EG+ F+SMR E + P +EHY C+VDL RA +LE+A II+ + ++P VW SLL + R++ N+EL ASK L L Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKV--NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438 HSP 2 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 55/241 (22.82%), Postives = 112/241 (46.47%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYA-------------------------------RCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 ++MI + ++ + ++ + +R ++ +DL P++ T+ + E G +HG +RRG D+ V + L+++YA RCG + + +F+ M +RD ++WN++IS Y G +A+ +F M GV + ++ +SVL AC+ G +++G+ S + + ++ +V +VDL + +E+A ++ + E W S L Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA-HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSAL 313
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP329_ARATH (Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40 Identity = 86/235 (36.60%), Postives = 137/235 (58.30%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSLSLQ 713 ++MI+ + N + +A LFR M ++ LCPN + +V G+ HG +++ G S V +AL MY +CG+++ + FD + +++ V WN +I YG +G G +A+ ++++MI G P I+FVSVL ACSH+GLVE G + SM++ H + P ++HY C+VD LGRA +LE+A K+ E + +W LL SCR+H +V LA R ++ + L Q Sbjct: 487 NSMISGFRHNMLDTKALILFRRM-HQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQ 720 HSP 2 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 55/212 (25.94%), Postives = 103/212 (48.58%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDH-MDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGV-SPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 +AM++ Y+ EA FR+M + +L P+ T+ + E GK IHG ++R + +VS L+ +Y+ C K+E+ +C+FD +++ D+ WNS+IS + + KA+ +F+ M V P+ SF +VL +CS + G+ + K V S A + D+ + +++ A + D + +W ++ Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQM--QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFF-DAVLRKNTVIWNEMI 592 HSP 3 Score: 81.2629 bits (199), Expect = 6.051e-15 Identity = 59/223 (26.46%), Postives = 102/223 (45.74%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMI---MESHDLCPNSVTMVSVXXXXXXXXXX----EQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLR---IEPGPKVWGSLLGSC 647 +A+I AR EA ++FR M ++ +C +++ +S E GK IH LR G L + ++L+ +YA+ + + +F M + +VVSWN +I +G K+++ M G P+ ++ +SVLGAC +G VE G+ +F S + +PSV + M+ EEA ++ ++P +L SC Sbjct: 209 TAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS-----IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
BLAST of FC932385 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.868e-40 Identity = 90/232 (38.79%), Postives = 138/232 (59.48%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIHCNVELAERASKGFLSL 704 +++I +A+N + A ELF+ M + T+ SV E G H I++ D IL +ALV MY +CG LE VF+ M +RDV++W+++IS +GY +A+++F+ M G P+ I+ V VL ACSHAGL+E+G F SM+K + + P EHY CM+DLLG+A KL++A K++ ++ EP W +LLG+CR+ N+ LAE A+K ++L Sbjct: 229 NSIIGGFAQNSRSDVALELFKRM--KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456 HSP 2 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 56/212 (26.42%), Postives = 101/212 (47.64%), Query Frame = 3 Query: 9 SAMIACYARNGMAFEASELFREMIMESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACSHAGLVEEGKMLFESMRKEHMVRPSVEHYA--CMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLL 638 + MI+ Y++ + +A EL ++M ++ PN T SV +M+H I++ GL+S + V SAL+ ++A+ G+ E VFD M D + WNS+I + + A+++FK M G + SVL AC+ L+E G H+V+ + +VD+ + LE+A ++ ++ E W +++ Sbjct: 131 TTMISAYSKCKIHQKALELL--VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG-----MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMI 331 HSP 3 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 51/220 (23.18%), Postives = 105/220 (47.73%), Query Frame = 3 Query: 81 MESHDLCPNSVTMVSVXXXXXXXXXXEQGKMIHGCILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGACS--------HAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLG----SCRIHCNVELAERASK-GFLS 701 ++SH L +S T + +G +I + G ++ +V+ L+ MY + L +FD M +R+V+SW ++IS+Y KA+++ M+ V P+ ++ SVL +C+ H G+++EG + + VR + ++D+ + + E+A + +++ + VW S++G + R +EL +R + GF++ Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG------LESDVFVR------SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258 The following BLAST results are available for this feature:
BLAST of FC932385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932385 ID=FC932385; Name=FC932385; organism=Citrus clementina; type=EST; length=733bpback to top |