FC932386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 79/231 (34.20%), Postives = 109/231 (47.19%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAE-VAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQL---------SQEGEMGWMGDKMGEFFNE 697 LP ECIS IIS ++ RDAC ++ F+SA SD VWEKF+P +YE +F LC ++IN ++K +GK+C M+ A + +T W W P S + E V EL WFEI+ R T+ LS +T Y+ Y+VF D YGF +E V G + E R + + M + E GWM ++GEFFNE Sbjct: 43 LPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYES------LLSRSQHFSSKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNLSTHHT---WKWITNPVSAWLETVPELLTTRWFEIRCRTNTRFLSPRTRYSVYIVFLKADICYGFAYVAMEAVVRMVGHELSESCRRYVCFHEAMEWQFLTRKNLVNPERREDGWMEIEIGEFFNE 264
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 64/179 (35.75%), Postives = 94/179 (52.51%), Query Frame = 2 Query: 32 VLPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGV 568 +LP C++ I+S +T D S+ +F+ A DSD+VWEKFLP+DY Y LC + I+I+NG F ++K SGK +++ +R+ I W + YW WS +SRF+E +L + W EI G+I+T LS T Y AYL+ K YG + P E + Sbjct: 1 MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDY--CHVISRSTDPHRIFSSKKELYRCLCES-ILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSI 176
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2B14_ARATH (F-box protein PP2-B14 OS=Arabidopsis thaliana GN=PP2B14 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 66/179 (36.87%), Postives = 99/179 (55.31%), Query Frame = 2 Query: 32 VLPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGV 568 +LP CI+ I++ ++ DA SS +F+ A DSD+VWEKFLPSDY+ Y LC + ++I+N F ++K SGK +++ AR+ I + SYW WS + +SRF+E AEL + EI+G+I+T++LS T Y AYL+ K YG + P E + Sbjct: 3 MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNISSKKEI--YRCLCDS-LLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSDSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSI 178
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2B13_ARATH (F-box protein PP2-B13 OS=Arabidopsis thaliana GN=PP2B13 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24 Identity = 67/205 (32.68%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 32 VLPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQLSQ 646 +LP C++ I++ ++ DA SS +F+ A DSD+VWEKFLPS Y+ Y LC + ++I+N F ++K SGK +++ AR+ I + + SY WS + +SRF+E AEL EIKG+I+T +LS T Y AYL+ K + YG + P E V + + + L + Q+ + Sbjct: 3 MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIFSSKKEI--YRCLCDS-LLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSKNGQNNKNTTYLCCLDEKKQQMKR 204
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: PP2B3_ARATH (F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 47/114 (41.23%), Postives = 58/114 (50.88%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSY 376 LP CIS IIS +T RDAC ++ F+SA SD VWEKFLP DY F LC P++I G SF LDK SG+KC M+ + I W N+P + Sbjct: 16 LPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPESRVFLSKKELC------FSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 56/231 (24.24%), Postives = 94/231 (40.69%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKI------LSLKTIYAAYL------VFKFVDTRYGFERRPIEFGVH-FEGSDTEERYRVVLDLPKDMPQLSQEGEMGWMGDKMGEF 688 +P C++ + T + C + F+ AA SD VWEK LP +Y+ F + PI ++ +D+ +G+ C + AR I YW W ESRF VA L+ +WWFE+ G + + LS + + V F + +G++ +P+ F + +G + Y LD + L + W+ ++GEF Sbjct: 24 IPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPPERYHSLSKKDI---FAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHF-ELTHGWDLKPVRFSLSTSDGQEASCEY--YLDDVERNEALGKHKRGYWIEYRVGEF 248
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 36/149 (24.16%), Postives = 66/149 (44.30%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILS 481 LP C++ I++ + CR + +F+ A+ +D++WE LP++Y + P + ++GT +DK +G+ C + ++ I + YW ESRF A ++ +WWFE+ G E + S Sbjct: 28 LPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYR--VIAHKVFDEITLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDESRFQSAAYVQQIWWFEVGGEFEIQFPS 174 The following BLAST results are available for this feature:
BLAST of FC932386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932386 ID=FC932386; Name=FC932386; organism=Citrus clementina; type=EST; length=707bpback to top |