FC932394

Overview
NameFC932394
Unique NameFC932394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 1.864e-71
Identity = 123/197 (62.44%), Postives = 148/197 (75.13%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART C+FDASG+G C TGDC G+L+C GYG APNTLAEYALKQFN++DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN  CPV K DEYCC    + +C PT +S++FK +CPD YSYPKDDATSTFTCP GT+
Sbjct:   24 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTN 220          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.864e-71
Identity = 118/194 (60.82%), Postives = 143/194 (73.71%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGT 688
            F++ NNCP TVWAAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN PC      +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTC + T
Sbjct:   25 FEVHNNCPYTVWAAATPIGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWT 218          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71
Identity = 118/194 (60.82%), Postives = 143/194 (73.71%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGT 688
            F++ NNCP TVWAAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC      +YCC  G CGPT  S++FK RCPD YSYP+DD TSTFTC + T
Sbjct:   25 FEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWT 218          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71
Identity = 122/197 (61.93%), Postives = 147/197 (74.62%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART CQFDASG+G C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  F     S C+R  +C  ++   CP EL+  G CN  CPV K DEYCC    + NC PT +S++FK +CPD YSYPKDDATSTFTCP GT+
Sbjct:    3 FTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTN 199          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.525e-60
Identity = 109/195 (55.90%), Postives = 136/195 (69.74%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCP 679
            F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN  C V +T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP
Sbjct:   25 FEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCP 216          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.646e-59
Identity = 108/195 (55.38%), Postives = 133/195 (68.21%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVPG------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCP 679
            F+I N C  TVWAAA  G      GGRQL+ G++WTI  EPGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN  C V +T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP
Sbjct:    3 FEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCP 194          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.061e-58
Identity = 106/196 (54.08%), Postives = 130/196 (66.33%), Query Frame = 2
Query:  113 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            KFDI N C  TVWAA +PGGG++LD+GQTWT+    GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C V KTD+YCC +    NC  T +SK FK++CP  YSY KDD T+TF C +GTD
Sbjct:   28 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTD 218          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.440e-39
Identity = 90/206 (43.69%), Postives = 111/206 (53.88%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVPG-------GGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SSVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVLKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 676
            F + NNCP TVWA  + G       GG +L  G +  +TA  G  + R WART C FDASG G+C TGDC GL  C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C    TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TSTFTC
Sbjct:   26 FTLRNNCPTTVWAGTLAGQGPKLGDGGFELTPGASRQLTAPAGW-SGRFWARTGCNFDASGNGRCVTGDCGGL-RCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC 228          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.947e-36
Identity = 86/211 (40.76%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  113 KFDITNNCPDTVWAAAVPGGGR--------QLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--SVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVLKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 676
            KF  TN CP+TVW   + GGG         +L  G + ++T +    + R W R+ C  D+SGK KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C  L   +YCC         C PT FSK FK++CP  YSY  DD +STFTC
Sbjct:   24 KFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQ-APWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTC 232          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31
Identity = 81/218 (37.16%), Postives = 106/218 (48.62%), Query Frame = 2
Query:  113 KFDITNNCPDTVWAAAVPGG--------GRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVLKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            K   TNNCP+TVW   + G         G +L    + ++ A P   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP  L+V         C   C      +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G D
Sbjct:   26 KITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDA-PSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPD 239          
The following BLAST results are available for this feature:
BLAST of FC932394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
ZEAM_MAIZE1.864e-7162.44Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
OS35_SOLCO1.864e-7160.82Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC3.179e-7160.82Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
IAAT_MAIZE3.179e-7161.93Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
THM2_THADA2.525e-6055.90Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA3.646e-5955.38Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS1.061e-5854.08Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH1.440e-3943.69Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY1.947e-3640.76Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1A_MALDO2.462e-3137.16Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]

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Properties
Property NameValue
Genbank descriptionC34208B06EF PostHarveN Citrus clementina cDNA clone C34208B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932394 ID=FC932394; Name=FC932394; organism=Citrus clementina; type=EST; length=692bp
AAACTTATCTATTTTCATATTCATTATCCTCTCCAAAATGAAGTTCGTTA
AAGCTCTTCCCATTTCTTCTGCTCTTCTTATTATCATTTCCATCACCCTG
ACTCATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCTG
GGCCGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACAT
GGACCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGA
ACCAAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGA
CTGTAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCT
TGGCCGAGTACGCGTTGAAGCAATTCAACGACATGGATTTCATTGACATG
TCCAACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCC
CTCATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCC
CGAATGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGCTC
AAGACCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTTT
CTCCAAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAGG
ATGACGCTACCAGCACATTTACTTGCCCGACTGGGACAGACT
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