FC932409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.793e-20 Identity = 49/106 (46.23%), Postives = 59/106 (55.66%), Query Frame = 2 Query: 41 ASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNG-CQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 A A+ CGSQ GG C G CCSKFG+CGNT YC +G CQSQC G +F+Q+LKHRN+ +C GK FY+Y+AFI AA SF Sbjct: 24 ALAQNCGSQGGGKACASGQCCSKFGWCGNTNDYCGSGNCQSQCPG-----------GGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSF 118
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.678e-18 Identity = 44/101 (43.56%), Postives = 52/101 (51.49%), Query Frame = 2 Query: 53 QCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 QCGSQAG A CP LCCS G+CG T AYC GC SQC +FEQ+L +RN+ +CPGKGFYTYDA+ A + Sbjct: 25 QCGSQAGNATCPNDLCCSSGGYCGLTVAYCCAGCVSQCRNCFFT-----------------------ESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFY 102
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: WIN1_SOLTU (Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.625e-13 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 20 LYKKALLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYC--TNGCQSQCSG 172 L+ A +A+A+QCG Q GGA+C G LCCS+FG+CG+TP +C + GCQS+C+G Sbjct: 16 LFSIAAIANAQQCGRQKGGALCSGNLCCSQFGWCGSTPEFCSPSQGCQSRCTG 68
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: WIN2_SOLTU (Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.054e-12 Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 38 LASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYC--TNGCQSQCSG 172 +A+A+QCG Q GGA+C LCCS+FG+CG+TP YC + GCQSQC+G Sbjct: 22 VANAQQCGRQRGGALCGNNLCCSQFGWCGSTPEYCSPSQGCQSQCTG 68
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: HEVL_ARATH (Hevein-like protein OS=Arabidopsis thaliana GN=HEL PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.861e-11 Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 2 Query: 44 SAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYC--TNGCQSQCSG 172 + +QCG Q GG CPG +CCS++G+CG T YC TN CQS C G Sbjct: 20 AGQQCGRQGGGRTCPGNICCSQYGYCGTTADYCSPTNNCQSNCWG 64 The following BLAST results are available for this feature:
BLAST of FC932409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932409 ID=FC932409; Name=FC932409; organism=Citrus clementina; type=EST; length=356bpback to top |