FC932410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932410 vs. ExPASy Swiss-Prot
Match: SYFA_YEAST (Phenylalanyl-tRNA synthetase alpha chain OS=Saccharomyces cerevisiae GN=FRS2 PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 55/188 (29.26%), Postives = 98/188 (52.13%), Query Frame = 2 Query: 167 DVINVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGK----QVSRKVQNVE-----DKVKDLLLQVQNGHALSKEE---ISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKEIGVQEYNFNAKG 694 DV++ + SL ++ + T+ LT EG + EGS E++L + G + ++ KL P V K+G ++A KN W+ ++S K+QN + D+ + +L Q++N L + ++ LK RKLI ++V KGP ++ K+ TDLT + + +K++ + YNFN++G Sbjct: 32 DVLSALNSLKAHNKLEFSKVDTVTYDLTKEGAQILNEGSYEIKLVKLIQELGQLQIKDVMSKLGPQVGKVGQARAFKNGWIAKNASNELELSAKLQNTDLNELTDETQSILAQIKNNSHLDSIDAKILNDLKKRKLIAQGKITDFNVTKGPEFSTDLTKLETDLTSDMVSTNAYKDLKFKPYNFNSQG 219
BLAST of FC932410 vs. ExPASy Swiss-Prot
Match: SYFA_NOSCE (Probable phenylalanyl-tRNA synthetase alpha chain OS=Nosema ceranae (strain BRL01) GN=NCER_100038 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15 Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 164 NDVINVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVE-MGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKEIGVQEYNFNAKG 694 N++ V+ SL I ++ + LT EG+ GS E L+ ++ G + L+ + +G A KNKW++ +G +V + NVED VK++L V N KEEIS LK RKLI Y ++KGP Y + T+L + + G++K + + YNFN KG Sbjct: 27 NELYPVLLSLASKEIISFTFKEQIIYKLTEEGESILKNGSYEFNLYNSIGDNG-------MELLEVDKYNLGKVNAFKNKWIKKVGDKVYKSADNVEDNVKNMLNNVTN-KIYQKEEISLLKKRKLIYQAKEVVYFIKKGPLYGKDSDNI-TELISKMVISGEYKHLNFKPYNFNTKG 195
BLAST of FC932410 vs. ExPASy Swiss-Prot
Match: SYFA_ENCCU (Probable phenylalanyl-tRNA synthetase alpha chain OS=Encephalitozoon cuniculi GN=ECU07_1660 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 49/152 (32.24%), Postives = 87/152 (57.24%), Query Frame = 2 Query: 242 VLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM-GKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKEIGVQEYNFNAKG 694 VLT EG++ GS E L ++ +G +S +EL++ +G A +NKW+ G +V R V+++ED V+++++ ++ G A S EE+ +L+ RKL+ + + KGP + V T+LT E + G ++++ + YNFNA+G Sbjct: 54 VLTPEGEEVERSGSQEYLLLESIGEDG-MSIEELERH------SLGKMNAFRNKWIRREGNRVFRNVESIEDTVRNMVISMKRGTA-SAEEVEALRKRKLVSRRKKIVFIATKGPMFFDNTSYV-TELTSEMVLDGSYRDLSFKHYNFNAEG 196
BLAST of FC932410 vs. ExPASy Swiss-Prot
Match: SYFA_SCHPO (Phenylalanyl-tRNA synthetase alpha chain OS=Schizosaccharomyces pombe GN=SPAC3G9.06 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 57/200 (28.50%), Postives = 102/200 (51.00%), Query Frame = 2 Query: 104 EKNEQISDSGNFAAERGFDHNDVINVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGS-ISKDELQKKLDPAVFKIGCSQAGKNKWVEM-GKQVSRKVQNVEDKVKDLLLQV-QNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKEIGVQEYNFNAKG 694 EKNE + S + + + I SL I+ + E + LT EG+ A GS E +++ + A S ++ EL+KKL + IG +A K W++ G ++ + ++ D+ +L ++ ++G + ++ LK RKL+ +S+RKGPN++ + +K+ TDLT E + W+ + YNF A+G Sbjct: 17 EKNEIPNTSHLEFDGKKLGPQEAQSAILSLAAKNMIEFSRHEIEIYNLTAEGENICANGSHEAKVYNEICASMSGLNIGELKKKLGNSA-GIGQGRAFKLGWIKKDGDKLVKNTDSITDETPKVLSEIKEHGTISDSKTLTDLKKRKLVERNKIMYFSLRKGPNFSLQIEKLNTDLTAEMITSRSWESAKFKSYNFAAEG 215 The following BLAST results are available for this feature:
BLAST of FC932410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932410 ID=FC932410; Name=FC932410; organism=Citrus clementina; type=EST; length=699bpback to top |