FC932444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: GLYR1_DROME (Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster GN=CG4747 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38 Identity = 78/211 (36.97%), Postives = 122/211 (57.82%), Query Frame = 2 Query: 80 GFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLE-QICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDLGGIANP 709 GFLGLG+MG I +L+ G KV VWNRT+ KC GA V +P +V++ + ++DP A +VF GVL+ + K Y++MST+D +TS+ I I G +LEA + GS+Q A G L+IL+ G++++++E S I K FFLG IGN K+ L++ I+G + +E L L ++ + ++D+ DL + +P Sbjct: 319 GFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCCVSDPKGAKDLVFGNCGVLQLKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVGLAEALALADRFSISLNDIIDIFDLTSMKSP 529
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: GLYR1_DROPS (Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA18401 PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 79/215 (36.74%), Postives = 122/215 (56.74%), Query Frame = 2 Query: 68 KMEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLE-QICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDLGGIANP 709 ++ GFLGLG+MG I +L+ G KV VWNRT+ KC V GA V +P +V++ I ++DP A +VF GVL+ + K Y++MSTVD +TS+ I I G +LEA + GS+Q A G L+IL+ G++ +++E S I K FFLG +GN K+ L++ I + +E L L ++ + ++D+ DL + +P Sbjct: 325 ELTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFVEAGAEVKDTPMDVVEAADIIFCCVSDPKGAKDLVFGNCGVLQLKDLRNKAYVEMSTVDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAADGMLIILAGGDRTVFEECHSCFKTIAKNTFFLGNVGNACKVNLILQTIQAVSLVGLAEALALADRFSISLNDIIDIFDLTSMKSP 539
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: GARR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.550e-28 Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = 2 Query: 71 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDLGGIA 703 M+VGF+GLGIMGK +S NLL+ G+ + V +R +++A GA + + ++C + I ML + V + G++E PG IDMS++ S +IS A+ +KG L+APVSG + A G L ++ G+KA++D+ + + GEIG G KL +I+ + SE L L K+G++P + + GG+A Sbjct: 1 MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI-RGGLA 210
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: GARR_ECOL6 (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6 GN=garR PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.550e-28 Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = 2 Query: 71 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDLGGIA 703 M+VGF+GLGIMGK +S NLL+ G+ + V +R +++A GA + + ++C + I ML + V + G++E PG IDMS++ S +IS A+ +KG L+APVSG + A G L ++ G+KA++D+ + + GEIG G KL +I+ + SE L L K+G++P + + GG+A Sbjct: 1 MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI-RGGLA 210
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: YFJR_BACSU (Uncharacterized oxidoreductase yfjR OS=Bacillus subtilis GN=yfjR PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26 Identity = 70/205 (34.15%), Postives = 111/205 (54.15%), Query Frame = 2 Query: 71 MEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAK-MKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDV 682 M++ +GLG MG+ I+ N+L+ G+++TV+NRT K ++LV GA +P K I I MLAD + +V F + G+LE + +I MST+ E S K++ A KG FL APV G A L I++AG A L+ + ++ F +GE A K+ +N ++ M+ SE ++ EK GL+ + L++ Sbjct: 1 MKIAVIGLGNMGQPIARNVLQAGYELTVYNRTKQKTEDLVTEGAQAADTPRLAAKSADIVITMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEFSEKLAAAHAEKGQFFLAAPVLGRPDAAAKAALRIITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLLVSMLEALSESFLMMEKYGLEQKQFLEI 205
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: 3HIDH_MOUSE (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.261e-26 Identity = 66/208 (31.73%), Postives = 108/208 (51.92%), Query Frame = 2 Query: 68 KMEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDL 691 K VGF+GLG MG ++ NL+++G+ + +++ C E G V SPAEV +K I ML A+ V G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G +G G K+ NM++ M +E + L +SGLDP+ L +L++ Sbjct: 38 KTPVGFIGLGNMGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITMLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNM 245
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: 3HIDH_RAT (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26 Identity = 64/208 (30.77%), Postives = 109/208 (52.40%), Query Frame = 2 Query: 68 KMEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDL 691 K VGF+GLG MG ++ NL+++G+ + +++ C E G V SPA+V +K I ML ++ V G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G +G+G K+ NM++ M +E + L +SGLDP+ L +L++ Sbjct: 38 KTPVGFIGLGNMGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITMLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNM 245
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: 3HIDH_DICDI (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25 Identity = 62/204 (30.39%), Postives = 105/204 (51.47%), Query Frame = 2 Query: 77 VGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLD 688 VGF+GLG MG ++NL++ G + V++ + + L GA + SPAEV K+ + + ML A +V + G+ + + PG +D ST+D T+ +++ L+ PVSG AE G L + G + ++ A + L +GK G++G G K+ N+++G M SE + L K G+DP+ L + + Sbjct: 25 VGFIGLGNMGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDPKKLAGIFN 228
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: YKWC_BACSU (Uncharacterized oxidoreductase ykwC OS=Bacillus subtilis GN=ykwC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.789e-24 Identity = 62/209 (29.67%), Postives = 108/209 (51.67%), Query Frame = 2 Query: 68 KMEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDLG 694 K +GF+GLG+MGK+++ ++L +G V V+ RT K + ++ GA + ++ K+ + I M+ P+ V F G++E G IDM+T + KI+ A K L+APVSG A+ G L I+ GEK ++ + +++G+ + G G+G K+ + + M +E + +KSGL+P +L + G Sbjct: 2 KKTIGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKDTVKDLSKEADVIITMVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEPENVLKSITTG 210
BLAST of FC932444 vs. ExPASy Swiss-Prot
Match: 3HIDH_PONAB (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24 Identity = 63/208 (30.29%), Postives = 106/208 (50.96%), Query Frame = 2 Query: 68 KMEVGFLGLGIMGKAISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEIGNGAKMKLVVNMIMGCMMNTFSEGLVLTEKSGLDPRTLLDVLDL 691 K VGF+GLG MG ++ NL+++G+ + +++ C E G V SPA+V +K I ML A+ G+L+++ G ID ST+D S ++++ + G F++APVSG A +G L + G + + A L +G + G +G G K+ NM++ M +E + L + GLDP+ L +L++ Sbjct: 39 KTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNM 246 The following BLAST results are available for this feature:
BLAST of FC932444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932444 ID=FC932444; Name=FC932444; organism=Citrus clementina; type=EST; length=714bpback to top |