FC932521

Overview
NameFC932521
Unique NameFC932521
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932521 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 43/180 (23.89%), Postives = 86/180 (47.78%), Query Frame = 3
Query:   96 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDL 635
            +L+  +  F    K    +LPPGP   P+IGNL +      ++   LA+++GP+  L++G V  V  SS   A+E+L+  D   C+R     + A  ++   +   P    W  +RK+     FS ++L + +++  ++    +  + E     + +++ +A F    N++    + I+L
Sbjct:    9 VLLPLILIFLNVLKPSKYKLPPGPKKLPIIGNLHQRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGNIVCRIGYGINL 188          
BLAST of FC932521 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 42/113 (37.17%), Postives = 59/113 (52.21%), Query Frame = 3
Query:  150 RLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSR 476
            +LPPGP P P+ GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  +AKE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++
Sbjct:   32 KLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNK 141          
The following BLAST results are available for this feature:
BLAST of FC932521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
C71BF_ARATH4.373e-1123.89Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
TCMO_GLYEC5.712e-1137.17Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]

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Properties
Property NameValue
Genbank descriptionC34209E04EF PostHarveN Citrus clementina cDNA clone C34209E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932521 ID=FC932521; Name=FC932521; organism=Citrus clementina; type=EST; length=763bp
GACCTGAATTTGGTGTTTACAAGAGCTTCAAACAAAAGAGAGCGAGATTA
AAGATGGATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTT
GGTCGTCGCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAA
GGCTTCCACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAA
CTCGGCGACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGG
CCCCATAATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTT
CTGCAGCCATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGT
AATCGAACAATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGG
GATGCCCTGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATAT
GCAACTCACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCTT
CGGCGTAAGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCCG
TGCAGGTACAGCAATACATATTGGCCAAGCTGCTTTCGACACTACGCTTA
ATTTGATATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATCA
AAAACTGCGCGAGAGTTTAAAGCAACAATTGGGGTATGATGGAAGAAGCT
GGAAGCTAACTTGTCGATTTTTTCCTGTGCTTGAGAAATCTGACTGCAGG
TATAAGCGTCCAT
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