FC932531

Overview
NameFC932531
Unique NameFC932531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC932531 vs. ExPASy Swiss-Prot
Match: GPMA_CHLP8 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlorobaculum parvum (strain NCIB 8327) GN=gpmA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 2 
Query:  155 EIIVVRHGEAPWNVQGKVQGQLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVIEDPELRERHLGDLQGLVFREAAK 448
            +++++RHGE+ WN + +  G +D++L+E GRE+A +  + L  E F   + Y+S LKRA+ T  T+ ++     + V +   L ERH G LQGL   E A+
Sbjct:    3 KLVLLRHGESQWNRENRFTGWVDIDLSEKGREEAKAAGQLLKDEGFVFDMAYASVLKRAIRTLWTVLDQMDLMWIPVTKSWRLNERHYGALQGLNKTETAQ 103
The following BLAST results are available for this feature:
BLAST of FC932531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
GPMA_CHLP89.673e-1136.632,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Properties
Property NameValue
Genbank descriptionC34209F02EF PostHarveN Citrus clementina cDNA clone C34209F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932531 ID=FC932531; Name=FC932531; organism=Citrus clementina; type=EST; length=758bp
GAATAATATTCTTGCATGCGTAAAAATCCCAAAACATTTCTGCGCGGAAT
CGGAACGGATTCAGAGGCACTCAAAACCCGGGAACATGGCCGAGTCAACG
GAGTCTCCAGCAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTGATTA
TTGTGAGATCATTGTGGTGCGTCACGGTGAAGCGCCTTGGAACGTTCAAG
GAAAAGTTCAGGGGCAGTTAGATGTTGAATTGAATGAAGTTGGAAGAGAG
CAAGCTGTTTCTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTTCTGT
TATCTATTCTTCTGACCTGAAGCGAGCACTCGAAACTGCACAGACAATTG
CAAACAGATGTGGTGGGCTAAAGGTCATTGAAGATCCTGAACTAAGGGAA
AGACATCTTGGAGATCTTCAAGGCCTTGTTTTCCGTGAAGCAGCCAAAGT
CTGTCCTATAGCATATCAAGCATTTTTATCTGGCAAGACAGATCAAGATA
TCCCTGGTGGTGGAGAAAGTCTTGATCAACTTTATCGACGGTGCACGTCT
GCATTGCAGAGAATTGCTAGGAAGCATATAGGAGAGCGAATAGTAGTTGT
GACTCATGGTGGTGTAATCAGAACACTCTACCACGGGCTTGCCCAAACAA
AAGCCTGAAAGGTAGGTCCTGAATCATCTATCACATATTTAGGTGACTGA
AAAAACAGCGGGTCTTAAAACCTGGGGTGATGTAGTCATCTCACAAACAG
ATTCTAAG
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