FC932594

Overview
NameFC932594
Unique NameFC932594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.960e-74
Identity = 142/231 (61.47%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L FVKG+VDSEDLPLNISRE+LQQNKILKVIRKNLVKKC+E+F EI E KE+Y KFYE FSKNLKLGIHEDS N+ K+AELLR+HS+KSG+++ S K+YV RMKEGQ DIYYITGES++ V NSPFLEKL KKGYEVLYM D IDEYAV QLKEF+  KL   T                           K+IK+VL                PC LVT E+GW+A
Sbjct:  362 IPEWLNFVKGVVDSEDLPLNISRESLQQNKILKVIRKNLVKKCLEMFAEIEEKKENYAKFYEQFSKNLKLGIHEDSANRAKIAELLRFHSSKSGEDMVSFKEYVDRMKEGQKDIYYITGESRQTVANSPFLEKLTKKGYEVLYMTDPIDEYAVQQLKEFDNHKLRCCTKEGLEIDESEEEKKKFEELKAEFEPLLKLIKEVLHDKVDKVVLSNRITDSPCVLVTTEFGWSA 592
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  379 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 609
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  379 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 609
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  379 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 609
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  378 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 608
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  379 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 609
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.551e-73
Identity = 141/231 (61.04%), Postives = 162/231 (70.13%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPE+L FVKG+VDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF E+ E KED+ KFYE FSKNLKLGIHED+ N++K+AELLR+ +TKSGDEL SLK+YV RMK  Q  +YYITGESK++V +SPFLE LK + YEVLYM D IDEYAV Q+KEFEGKKL   T                          CK IK+VL                PC LVT E+GW+A
Sbjct:  374 IPEWLSFVKGVVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFNELTEKKEDFKKFYEQFSKNLKLGIHEDNANRSKIAELLRFETTKSGDELVSLKEYVDRMKSDQKFVYYITGESKQSVASSPFLETLKARDYEVLYMTDPIDEYAVQQIKEFEGKKLKCCTKEGLELDEGEDEKKSFEALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDSPCALVTSEFGWSA 604
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.025e-73
Identity = 133/231 (57.58%), Postives = 169/231 (73.16%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            +PEYL F+KG+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF EIAE+K+++ KFYE FSKN+KLGIHEDSTN+ KL+E LR++++ S +E+TSLKDYV+RMKE Q  IY+ITGES++AV +S F+E++K++G+EV+YM D IDEY V QLKE++GKKLVS T                          CKV+KD+L                PCC+VT EYGW+A
Sbjct:  360 MPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFDEIAEDKDNFKKFYEQFSKNIKLGIHEDSTNRKKLSEFLRFYTSASSEEMTSLKDYVSRMKENQKQIYFITGESREAVASSAFVERVKRRGFEVIYMTDPIDEYCVQQLKEYDGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCKVMKDILEKKVEKVAVSNRLVSSPCCIVTSEYGWSA 590
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 2.025e-73
Identity = 136/231 (58.87%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  +YYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  374 IPEYLNFMRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHVYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKAKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 604
[Close]
BLAST of FC932594 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73
Identity = 136/231 (58.87%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTA 693
            IPEYL F++G+VDSEDLPLNISRE LQQ+KILKVIRKNLVKKC+ELF E+AE+KE+Y KFYE FSKN+KLGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IY+ITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS T                          CK++KD+L                PCC+VT  YGWTA
Sbjct:  379 IPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTA 609
The following BLAST results are available for this feature:
BLAST of FC932594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
HSP90_EIMTE6.960e-7461.47Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HS90A_PIG9.091e-7459.31Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR9.091e-7459.31Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA9.091e-7459.31Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN9.091e-7459.31Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_BOVIN9.091e-7459.31Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HSP90_THEAN1.551e-7361.04Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_BRUPA2.025e-7357.58Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HS90A_CHICK2.025e-7358.87Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HS90A_RAT2.645e-7358.87Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionC34210C10EF PostHarveN Citrus clementina cDNA clone C34210C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932594 ID=FC932594; Name=FC932594; organism=Citrus clementina; type=EST; length=696bp
ATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCT
CCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGG
TCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATT
GCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAA
CCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTG
AGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTG
AAGGATTATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACAT
CACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTTGAGAAGC
TCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAG
TACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGC
AACCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGA
AGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGAT
GTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGA
CTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCACA
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