FC932641

Overview
NameFC932641
Unique NameFC932641
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.806e-27
Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 3
Query:  219 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIK 686
            DET C +   G  +C+  CGFFGS AT NMCS+CY++     D  + AA++   +          E V  A    + + +   +     S +S  +E   AK    P+RC++C+K+VGLTGFKCRCG  +C  HR++D H C FDY++A ++ I K
Sbjct:   11 DETACGSGA-GAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDL----------ELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAK 155          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.826e-26
Identity = 62/144 (43.06%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  258 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKA 689
            LC NNCGFFGS AT+++CSKCY+D   ++  A +  ++  S    T  S+ S S   A +                S A+E    V A  K   SRC+SC+KRVGLTGF CRCG  +C +HRY ++H C FD++ A RDAI +A
Sbjct:   14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLP--------------SSTAAEAGVVVAAVAKA--SRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARA 141          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26
Identity = 58/160 (36.25%), Postives = 89/160 (55.62%), Query Frame = 3
Query:  252 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAK--------------PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKA 689
            P LC NNCGFFGS AT N+CSKC++D+  ++  +  A  ++            ++S+AA      +S      +S  P   ++  E VEAK              P + P RC +C++RVG+TGF+CRCG ++C +HRY+++H C FD++   +D I KA
Sbjct:   10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHAL------------TQSLAAVGAAASSS------VSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKA 151          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  258 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIK 686
            LC N+CGF G+ AT N+C  C+         +  AAS        T+S      V      VQ+S+     + V+   A  +  S +A      +RC SC++RVGLTGF+CRCG LYC +HRYSD+H+C FDY++AARDAI +
Sbjct:   21 LCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASP------STTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIAR 157          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 68/186 (36.56%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  252 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP----SCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIK 686
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A +T+D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 66/186 (35.48%), Postives = 92/186 (49.46%), Query Frame = 3
Query:  252 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP-----------------------------------SCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIK 686
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S     V   S S      +GS   A + +D  ASSV+P  +S Q                                      + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24
Identity = 58/153 (37.91%), Postives = 89/153 (58.17%), Query Frame = 3
Query:  234 QAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPS-RCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKA 689
            QA    P+LC + CGF+G+ AT++MCS CY+   L    A +A     S+   ++++  + +V + +  V ++ V     S + +      E      K+ P+ RC+SCKK+VGL GF CRCG  YC +HRY +KH C FD++ A+RDAI +A
Sbjct:  196 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNG-ATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFSSKNN-----PEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARA 342          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24
Identity = 68/193 (35.23%), Postives = 87/193 (45.08%), Query Frame = 3
Query:  249 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQ--------------------DQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSV-----------------------EPKIISVQPSCASELSESVEAK----PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIK 686
            GP+LC   CGF+G+  T  MCS CYK+ + +Q                    D A +  +  G  +N    + GS S  +  V V A  V                       EP +    PS +   S   E K    PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADAG--LNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRK 200          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 67/186 (36.02%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  252 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP----SCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIK 686
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC932641 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 67/191 (35.08%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  249 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQ------------AKLAASSIGSIVNETSSSNGSESVAAAT------VDVQASSV-----------------------EPKIISVQPSCA----SELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIK 686
            GP+LC   CGF+G+  T  MCS CYK+ + +Q              +    S   S+    +S N  E  A +T      V V A  V                       EP +    PS +    S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRK 200          
The following BLAST results are available for this feature:
BLAST of FC932641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
SAP7_ORYSJ4.806e-2737.82Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ1.826e-2643.06Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH5.313e-2636.25Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ9.063e-2641.26Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_PONAB1.309e-2436.56AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN1.709e-2435.48AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP3_ORYSJ2.915e-2437.91Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE3.808e-2435.23AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN6_HUMAN4.973e-2436.02AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN5_HUMAN8.483e-2435.08AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34210G09EF PostHarveN Citrus clementina cDNA clone C34210G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932641 ID=FC932641; Name=FC932641; organism=Citrus clementina; type=EST; length=693bp
GAAAGCCTTTTTAAAAAAATCAAAGAGAGAGAGAGAGACACCCGGAAAGG
GAAACGAGGACGTCTCTAATCGGTTTTTGCCTGCTCTCTCCCCGTAGGCC
GATCTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTGGCTTGAGCTCG
GGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTGCTCGCAGGGGT
GGTGAAAACATGGACCATGATGAGACTGGATGCCAAGCTCCTCCTGAGGG
CCCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTGTGGCTACTA
TGAATATGTGTTCCAAATGCTACAAGGATATAATGCTGAAACAGGATCAA
GCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGAAACGTCAAG
CAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATGTGCAAGCTA
GTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGTGCTTCAGAA
TTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAGCCGGTGCAG
CAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCAAATGTCGCTGTGGTA
ACTTATACTGTGTGTCACATCGCTATTCGGACAAACATAACTGCCCCTTT
GACTACCGCACTGCTGCTAGGGATGCTATAATTAAAGCAACCC
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