GH733268

Overview
NameGH733268
Unique NameGH733268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length252
Libraries
Library NameType
Citrus clementina pistils cDNA-AFLP librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.949e-11
Identity = 28/68 (41.18%), Postives = 48/68 (70.59%), Query Frame = 3
Query:   42 LETYIYNMRSTIN-DKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVITQ 242
            LE+  +NM+ST+  D L DKI  DD+++I     + + W+++NQ AEK++++ + KE+E VCN +IT+
Sbjct:  544 LESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITK 611          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 29/68 (42.65%), Postives = 47/68 (69.12%), Query Frame = 3
Query:   42 LETYIYNMRSTIN-DKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVITQ 242
            LE+Y +NM++T++ D L  KI   D+  I     E ++WLD NQ A+K++++ + KE+E VCNP+IT+
Sbjct:  542 LESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITK 609          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 3
Query:   42 LETYIYNMRSTINDK-LADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIT 239
            LE+Y  NM+S + D+ L  KI   DK+++    +E + WLD N  AEKD+F+ K KE+E VCNP+I+
Sbjct:  539 LESYALNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIIS 605          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 28/65 (43.08%), Postives = 47/65 (72.31%), Query Frame = 3
Query:   42 LETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVI 236
            LE+Y Y++++TI +      D DDK++IE  + E + WLD+NQ AEKD+++ + KE+EA+ NP++
Sbjct:  410 LESYAYSLKNTITEGKLQMSD-DDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIM 473          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 28/68 (41.18%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   42 LETYIYNMRSTINDK-LADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVITQ 242
            LE Y + M++T++++ +  K+  +D+++I   + E L+WLD N  AEKD+F+ + KE+E+VCNP+IT+
Sbjct:   31 LEGYAFQMKATLDEEAIKSKVSEEDRKKILDKVDEVLKWLDANALAEKDEFEHQRKELESVCNPIITK 98          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.430e-11
Identity = 29/69 (42.03%), Postives = 49/69 (71.01%), Query Frame = 3
Query:   42 LETYIYNMRSTINDK--LADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVITQ 242
            LE+Y Y++++ I DK  L  K+ S+DKE IE  ++E +EWL+ +Q+A+ +DF  K KE+E V  P++++
Sbjct:  563 LESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKSKKKELEEVVQPIVSK 631          

HSP 2 Score: 20.7866 bits (42), Expect = 3.430e-11
Identity = 6/12 (50.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:    4 EKEVRERVDSRN 39
            +K+++ER+D+RN
Sbjct:  550 DKKLKERIDARN 561          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.342e-11
Identity = 27/66 (40.91%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   42 LETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIT 239
            LE+Y Y++++TI++    +I  DDK+++   + E + WLD+NQ AEKD+++ + KE+E V NP+I+
Sbjct:  540 LESYAYSLKNTISEGQL-QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIIS 604          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.342e-11
Identity = 25/66 (37.88%), Postives = 53/66 (80.30%), Query Frame = 3
Query:   42 LETYIYNMRSTI-NDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVI 236
            LE+Y Y++R+++ + K+ +K+++ DKE+++S + + ++WLD+NQ A K++++ + KE+EAV NP++
Sbjct:  541 LESYAYSLRNSLRHSKVDEKLEAGDKEKLKSEIDKTVQWLDENQTATKEEYESQQKELEAVANPIM 606          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.670e-11
Identity = 25/68 (36.76%), Postives = 48/68 (70.59%), Query Frame = 3
Query:   42 LETYIYNMRSTIND-KLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVITQ 242
            LE Y Y+M++T++D  ++ K++  D+  +   +  ALEWL+ NQ A K++++ + KE+E+ CNP++T+
Sbjct:  119 LENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTK 186          
BLAST of GH733268 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.730e-11
Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 3
Query:   42 LETYIYNMRSTINDK--LADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVI 236
            LE+Y Y++++ I DK  L  K+ S+DKE IE  ++E +EWL+ +Q+A+ +DF  K KE+E +  P++
Sbjct:  566 LESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIV 632          

HSP 2 Score: 20.7866 bits (42), Expect = 9.730e-11
Identity = 6/12 (50.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:    4 EKEVRERVDSRN 39
            +K+++ER+D+RN
Sbjct:  553 DKKLKERIDTRN 564          
The following BLAST results are available for this feature:
BLAST of GH733268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
HSP70_PLEWA1.949e-1141.18Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP7D_DROME2.545e-1142.65Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP71_CERAE2.545e-1146.27Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_PENCI2.545e-1143.08Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
MAG29_DERFA3.324e-1141.18Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]
GRP78_CHICK3.430e-1142.0378 kDa glucose-regulated protein OS=Gallus gallus ... [more]
HSP70_EMENI4.342e-1140.91Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_AJECA4.342e-1137.88Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_LEIBR5.670e-1136.76Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
GRP78_XENLA9.730e-1141.7978 kDa glucose-regulated protein OS=Xenopus laevis... [more]

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Properties
Property NameValue
Genbank descriptionU_56 Citrus clementina pistils cDNA-AFLP library Citrus clementina cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>GH733268 ID=GH733268; Name=GH733268; organism=Citrus clementina; type=EST; length=252bp
GNGGAGAAAGAGGTGAGGGAGAGGGTTGATTCCAGGAACAGTTAGAAACT
TACATCTACAACATGAGGAGCACCATCAATGACAAGCTTGCGGACAAGAT
TGATTCTGATGATAAGGAGAGGATTGAGAGCACACTGAAGGAAGCTCTCG
AATGGTTGGATGATAATCAGAACGCAGAGAAGGATGATTTTGACGAGAAG
ATGAAGGAGGTGGAAGCTGTATGCAACCCTGTGATTACTCAGGACTCATC
AN
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