GH733308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 ++++G P G+S ++KR++I E++ NPS++ +DEPTSGLD GRTVV TIHQPS I+ FD+V+L Sbjct: 193 NSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLASGGRTVVTTIHQPSSRIYHMFDKVVL 276
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.362e-12 Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 D+ VG + G+S +RKR +I +EL+ +PSI+F+DEPT+GLD GRT++ +IHQP IF+ FD + L Sbjct: 175 DSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTL 258
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.362e-12 Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 D+ VG + G+S +RKR +I +EL+ +PSI+F+DEPT+GLD GRT++ +IHQP IF+ FD + L Sbjct: 175 DSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTL 258
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.085e-12 Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 D ++G G+S +RKR++IA+E++ P I+F+DEPTSGLD GRTV+ ++HQPS ++F FD++ L Sbjct: 158 DRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGRTVISSVHQPSSEVFALFDDLFL 241
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.029e-12 Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = -3 Query: 16 KPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 279 K D ++G+P + GLS ++KRL+ A E++ P I+F DEPTSGLD D G TV+ TIHQPS ++ F+ V L Sbjct: 121 KKCADTVIGIPNQLKGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVIITIHQPSSHVYSLFNNVCL 209
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.029e-12 Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 D+ VG G+S +RKR +I +EL+ +PSI+F+DEPT+GLD GRT++ +IHQP IF+ FD + L Sbjct: 174 DSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTL 257
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.029e-12 Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = -3 Query: 16 RDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 270 R VG V G+S +RKR +IA E++ +PS++ +DEPTSGLD GRTV+ TIHQPS +F FD++LL Sbjct: 225 RRTRVGGGFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAKAGRTVITTIHQPSSRMFHMFDKLLL 309
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.261e-12 Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 D ++G + G+S +++R++IA+E++ P ++F+DEPTSGLD GRTV+ +IHQPS ++FE FD + L Sbjct: 182 DTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYL 265
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: WHT3_CAEEL (ABC transporter ATP-binding protein/permease wht-3 OS=Caenorhabditis elegans GN=wht-3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.975e-12 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = -3 Query: 19 RDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVL 270 RD +G PG V G+S + +RLT A EL++NPS++F DEPTSGLD ++GRT+ IHQP+ ++F FD+++ Sbjct: 167 RDLKIGTPGLVKGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNLANSGRTL---IHQPTAELFFQFDKII 248
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: WHITE_ANOGA (Protein white OS=Anopheles gambiae GN=w PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.975e-12 Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = -3 Query: 16 DALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 D ++G PG + GLS +RKRL A E + +P ++ DEPTSGLD G+T++ TIHQPS +++ FD++LL Sbjct: 232 DTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDKILL 316 The following BLAST results are available for this feature:
BLAST of GH733308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >GH733308 ID=GH733308; Name=GH733308; organism=Citrus clementina; type=EST; length=293bpback to top |