BG732219

Overview
NameBG732219
Unique NameBG732219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length215
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 1.877e-30
Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG IDFPEFL +MARKM+DTD+EEE++EAF+V
Sbjct:   24 KDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKV 94          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 1.877e-30
Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFR 211
            KDGDG ITTKELGTVMRS+GQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+
Sbjct:   22 KDGDGTITTKELGTVMRSVGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFQ 91          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.877e-30
Identity = 61/71 (85.92%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            +DGDGCITT ELGTVMRSLGQNPTEAELQDM+ EVDADG+GTIDFPEFL+LMARKM+D+DSEEE++EAFRV
Sbjct:   22 RDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.877e-30
Identity = 59/71 (83.10%), Postives = 69/71 (97.18%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDGCITT+ELGTVMRSLGQNPTEAEL+DM++E+D DGNGT+DFPEFL +MARKMKDTD+EEE++EAFRV
Sbjct:   22 KDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_PNECA (Calmodulin OS=Pneumocystis carinii PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.201e-30
Identity = 62/71 (87.32%), Postives = 67/71 (94.37%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELG VMRSLGQNPTEAELQDM+NEVDADGNGTIDFPEFL +MARKMKD DSEEE++EAF+V
Sbjct:   24 KDGDGSITTKELGIVMRSLGQNPTEAELQDMVNEVDADGNGTIDFPEFLAMMARKMKDVDSEEEIREAFKV 94          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 3.201e-30
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LM+RKM DTD+EEE+KEAFRV
Sbjct:   22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 4.181e-30
Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+V
Sbjct:   22 KDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_MAGGR (Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4)

HSP 1 Score: 129.798 bits (325), Expect = 4.181e-30
Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+V
Sbjct:   22 KDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_EMENI (Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 4.181e-30
Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+V
Sbjct:   22 KDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKV 92          
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_COLTR (Calmodulin OS=Colletotrichum trifolii PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 4.181e-30
Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 2
Query:    2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214
            KDGDG ITTKELGTVMRSLGQNP+E+ELQDMINEVDAD NGTIDFPEFL +MARKMKDTDSEEE++EAF+V
Sbjct:   22 KDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKV 92          
The following BLAST results are available for this feature:
BLAST of BG732219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CALM_DICDI1.877e-3087.32Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_ACHKL1.877e-3090.00Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALMS_CHICK1.877e-3085.92Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALL3_HUMAN1.877e-3083.10Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]
CALM_PNECA3.201e-3087.32Calmodulin OS=Pneumocystis carinii PE=3 SV=1[more]
CALM_EUGGR3.201e-3088.73Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_NEUCR4.181e-3087.32Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2[more]
CALM_MAGGR4.181e-3087.32Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4[more]
CALM_EMENI4.181e-3087.32Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=... [more]
CALM_COLTR4.181e-3087.32Calmodulin OS=Colletotrichum trifolii PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCs-12d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-12d similar to Calmodulin, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG732219 ID=BG732219; Name=BG732219; organism=Citrus sinensis; type=EST; length=215bp
GAAGGACGGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGTTATGA
GGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATGATCAAT
GAAGTGGATGCTGATGGTAATGGAACTATTGATTTTCCTGAATTCCTAAA
CCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAAAG
AGGCCTTCCGGGTTT
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