BG732219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: TNNC1_PIG (Troponin C, slow skeletal and cardiac muscles OS=Sus scrofa GN=TNNC1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.337e-19 Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 11 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRV 214 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+ Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRM 103
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.337e-19 Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 11 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRV 214 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+ Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRM 103
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: TNNC1_HUMAN (Troponin C, slow skeletal and cardiac muscles OS=Homo sapiens GN=TNNC1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.337e-19 Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 11 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRV 214 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+ Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRM 103
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: TNNC1_BOVIN (Troponin C, slow skeletal and cardiac muscles OS=Bos taurus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.337e-19 Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 11 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRV 214 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+ Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRM 103
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: TNNC1_CHICK (Troponin C, slow skeletal and cardiac muscles OS=Gallus gallus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.661e-19 Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 11 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRV 214 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD +EEEL + FR+ Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRM 103
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: TNNC1_COTJA (Troponin C, slow skeletal and cardiac muscles OS=Coturnix coturnix japonica GN=TNNC1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.152e-18 Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 11 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRV 214 DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG+GT+DF +FL +M R MKD +EEEL + FR+ Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDQFLVMMVRCMKDDSKGKTEEELSDLFRM 103
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_YEAST (Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.811e-18 Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 2 Query: 2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214 KD +G I++ EL TVMRSLG +P+EAE+ D++NE+D DGN I+F EFL LM+R++K DSE+EL EAF+V Sbjct: 22 KDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKV 92
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CML5_ORYSJ (Calmodulin-like protein 5 OS=Oryza sativa subsp. japonica GN=CML5 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.178e-18 Identity = 47/83 (56.63%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM------------KDTDSEEELKEAFRV 214 KDGDGCIT +EL TV+RSLGQ PT EL +MI +VD DGNGTI+F EFL LMARK ++EEL+EAF+V Sbjct: 25 KDGDGCITLEELDTVVRSLGQTPTREELAEMIRDVDVDGNGTIEFAEFLALMARKASRGGENGGGGDDSGDAADEELREAFKV 107
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: TNNC2_ANGAN (Troponin C, skeletal muscle OS=Anguilla anguilla PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17 Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 5 DGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRV 214 DG G I+TKELGTVMR LGQNPT EL +I EVD DG+GTIDF EFL +M R++K+ SEEEL E FRV Sbjct: 30 DGGGDISTKELGTVMRMLGQNPTREELDAIIEEVDEDGSGTIDFEEFLVMMVRQLKEDQAGKSEEELAEFFRV 102
BLAST of BG732219 vs. ExPASy Swiss-Prot
Match: CALM_KLULA (Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17 Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 2 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 214 KD G I+ EL TVMRSLG +P+EAE+ D++NE+D DGN I+F EFL LM+R++K DSE+EL EAF+V Sbjct: 22 KDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKV 92 The following BLAST results are available for this feature:
BLAST of BG732219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BG732219 ID=BG732219; Name=BG732219; organism=Citrus sinensis; type=EST; length=215bpback to top |