BG733596

Overview
NameBG733596
Unique NameBG733596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length204
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 7.510e-11
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = -3 
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF++ +K+K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S +EG DF  T+TRA+F
Sbjct:  266 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKF 328
[Close]
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.510e-11
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = -3 
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF++ +K+K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S +EG DF  T+TRA+F
Sbjct:  265 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKF 327
[Close]
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.510e-11
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = -3 
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF++ +K+K  KD+  + RA+++LR   E+AKR LSS  Q  IEI+S +EG DF  T+TRA+F
Sbjct:  263 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKF 325
[Close]
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.809e-11
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = -3 
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF++ +K+K  KDI  + RA+++LR   E+AKR LS + Q  IEI+S +EG DF  T+TRA+F
Sbjct:  265 HFIKLYKKKKGKDIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKF 327
The following BLAST results are available for this feature:
BLAST of BG733596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
GRP78_MOUSE7.510e-1149.2178 kDa glucose-regulated protein OS=Mus musculus G... [more]
GRP78_MESAU7.510e-1149.2178 kDa glucose-regulated protein OS=Mesocricetus a... [more]
GRP78_CHICK7.510e-1149.2178 kDa glucose-regulated protein OS=Gallus gallus ... [more]
HSP7C_DROME9.809e-1149.21Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionCs-15b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-15b similar to HSP 70, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733596 ID=BG733596; Name=BG733596; organism=Citrus sinensis; type=EST; length=204bp
CGAATCTAGCCCTTGTAATGGTTGTGTAGAAATCAATACCCTCATATAAA
GAATCAATCTCAATTGTAGTCTGTGCAGTTGATGACAGGGTCCTCTTAGC
CCTTTCACAGGCAGTTCTCAACCTCCTCAACGCTCTGGGGTTTCCACTAA
TATCCTTCTTGTTTTTCCTCTTGAACTCTTGAACAAAGTGGGTTCACCAT
TCTG
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