BG733596

Overview
NameBG733596
Unique NameBG733596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length204
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 5.357e-25
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFVQEFKRK+KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARF
Sbjct:  238 HFVQEFKRKHKKDLSTNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.473e-24
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSL+EGIDFYT+ITRARF
Sbjct:  238 HFVTEFKRKHKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.473e-24
Identity = 53/64 (82.81%), Postives = 60/64 (93.75%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV EFKRK+KKDI GN RA+RRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFYT+ITRARF
Sbjct:  237 SHFVDEFKRKHKKDIMGNQRAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.535e-24
Identity = 53/64 (82.81%), Postives = 61/64 (95.31%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV+EFKRK+KKDIS N RALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFYT+ITRARF
Sbjct:  241 SHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.535e-24
Identity = 52/63 (82.54%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV EFKRK+KKDI GN RALRRLRTACERAKRTLSS++Q ++EIDSLY+GIDFYT+ITRARF
Sbjct:  241 HFVDEFKRKHKKDIMGNQRALRRLRTACERAKRTLSSSSQASVEIDSLYDGIDFYTSITRARF 303          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.923e-24
Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV EFKRK+KKD++ N RALRRLRTACERAKRTLSS AQT+IEIDSL+EGIDFYT+ITRARF
Sbjct:  108 HFVNEFKRKHKKDLTTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARF 170          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.736e-24
Identity = 52/63 (82.54%), Postives = 60/63 (95.24%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV+EFKRK+KKDIS N RALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFYT++TRARF
Sbjct:  242 HFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSVTRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFYT+ITRARF
Sbjct:  241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFYT+ITRARF
Sbjct:  241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFYT+ITRARF
Sbjct:  241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARF 304          
The following BLAST results are available for this feature:
BLAST of BG733596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
HSP70_NEUCR5.357e-2587.30Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_EMENI3.473e-2485.71Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HS7C1_DICDI3.473e-2482.81Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP70_ONCTS4.535e-2482.81Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS7C3_DICDI4.535e-2482.54Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP70_PENCI5.923e-2484.13Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP71_ORYLA7.736e-2482.54Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HS71L_RAT1.010e-2381.25Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_PIG1.010e-2381.25Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_MOUSE1.010e-2381.25Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionCs-15b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-15b similar to HSP 70, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733596 ID=BG733596; Name=BG733596; organism=Citrus sinensis; type=EST; length=204bp
CGAATCTAGCCCTTGTAATGGTTGTGTAGAAATCAATACCCTCATATAAA
GAATCAATCTCAATTGTAGTCTGTGCAGTTGATGACAGGGTCCTCTTAGC
CCTTTCACAGGCAGTTCTCAACCTCCTCAACGCTCTGGGGTTTCCACTAA
TATCCTTCTTGTTTTTCCTCTTGAACTCTTGAACAAAGTGGGTTCACCAT
TCTG
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