BG733596

Overview
NameBG733596
Unique NameBG733596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length204
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFYT+ITRARF
Sbjct:  241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFYT+ITRARF
Sbjct:  241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.010e-23
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +HFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFYT+ITRARF
Sbjct:  241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.320e-23
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            THFVQEFKRK+KKD++ N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EG DFYT+ITRARF
Sbjct:  239 THFVQEFKRKHKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.320e-23
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARF
Sbjct:  240 HFITEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.320e-23
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF  EFKRK KKD++ N RALRRLRTACERAKRTLSS+AQT++EIDSLYEGIDFYT+ITRARF
Sbjct:  240 HFANEFKRKYKKDLTTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLYEGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.723e-23
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARF
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.723e-23
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARF
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.723e-23
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARF
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.723e-23
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARF
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF 302          
The following BLAST results are available for this feature:
BLAST of BG733596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
HS71L_MACFA1.010e-2381.25Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HS71L_HUMAN1.010e-2381.25Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HS71L_BOVIN1.010e-2381.25Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP7D_DROME1.320e-2381.25Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP7C_DANRE1.320e-2382.54Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP71_PICAN1.320e-2382.54Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP7C_SAGOE1.723e-2382.54Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT1.723e-2382.54Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB1.723e-2382.54Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE1.723e-2382.54Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCs-15b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-15b similar to HSP 70, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733596 ID=BG733596; Name=BG733596; organism=Citrus sinensis; type=EST; length=204bp
CGAATCTAGCCCTTGTAATGGTTGTGTAGAAATCAATACCCTCATATAAA
GAATCAATCTCAATTGTAGTCTGTGCAGTTGATGACAGGGTCCTCTTAGC
CCTTTCACAGGCAGTTCTCAACCTCCTCAACGCTCTGGGGTTTCCACTAA
TATCCTTCTTGTTTTTCCTCTTGAACTCTTGAACAAAGTGGGTTCACCAT
TCTG
back to top