BG733596

Overview
NameBG733596
Unique NameBG733596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length204
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.839e-23
Identity = 49/63 (77.78%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF++EF+RK+ KD+SGN RALRRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFYT+ITRARF
Sbjct:  242 HFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 5.014e-23
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            H +QEFKRKNKKDI   P  +RRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFY+ ITRARF
Sbjct:  246 HSLQEFKRKNKKDIMETPGHIRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYSPITRARF 308          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.014e-23
Identity = 49/63 (77.78%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV+EF+RK++KD+S N RALRRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFYT+ITRARF
Sbjct:  242 HFVEEFRRKHRKDLSWNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.014e-23
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV+EFKRK+KKDI  N RALRRLRTAC+RAKRTLSS++Q +IEIDSL+EGIDFYT ITRARF
Sbjct:  241 HFVEEFKRKHKKDIGQNKRALRRLRTACDRAKRTLSSSSQASIEIDSLFEGIDFYTAITRARF 303          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.014e-23
Identity = 50/63 (79.37%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV EFKRK+KKDIS N RALRRLRTACERAKRTLS++ Q ++EIDSL++GIDFYT+ITRARF
Sbjct:  240 HFVDEFKRKHKKDISSNKRALRRLRTACERAKRTLSASTQASVEIDSLFDGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.549e-23
Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKR +KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARF
Sbjct:  240 HFIAEFKRNDKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.553e-23
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRK+KKDIS N RA+RRL TACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARF
Sbjct:  240 HFIAEFKRKHKKDISDNKRAVRRLATACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.553e-23
Identity = 49/63 (77.78%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFVQEF+RK+KKD+  N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EG+DFYT++TRARF
Sbjct:  240 HFVQEFQRKHKKDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.553e-23
Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFVQEFKRK+KKD+SG  R  RRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARF
Sbjct:  244 HFVQEFKRKHKKDLSGKARP-RRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARF 305          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.117e-22
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF+ EFKRK KKDIS N RA+RRLR+ACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARF
Sbjct:  240 HFIAEFKRKYKKDISDNKRAVRRLRSACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF 302          
The following BLAST results are available for this feature:
BLAST of BG733596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
HSP76_HUMAN3.839e-2377.78Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP7E_SPIOL5.014e-2382.54Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP76_SAGOE5.014e-2377.78Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP70_XENLA5.014e-2380.95Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_HYDMA5.014e-2379.37Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP7C_CRIGR6.549e-2380.95Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_ICTPU8.553e-2379.37Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7A_DROME8.553e-2377.78Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP70_BLAEM8.553e-2384.13Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP7C_ORYLA1.117e-2279.37Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]

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Properties
Property NameValue
Genbank descriptionCs-15b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-15b similar to HSP 70, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733596 ID=BG733596; Name=BG733596; organism=Citrus sinensis; type=EST; length=204bp
CGAATCTAGCCCTTGTAATGGTTGTGTAGAAATCAATACCCTCATATAAA
GAATCAATCTCAATTGTAGTCTGTGCAGTTGATGACAGGGTCCTCTTAGC
CCTTTCACAGGCAGTTCTCAACCTCCTCAACGCTCTGGGGTTTCCACTAA
TATCCTTCTTGTTTTTCCTCTTGAACTCTTGAACAAAGTGGGTTCACCAT
TCTG
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