BG733596

Overview
NameBG733596
Unique NameBG733596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length204
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.117e-22
Identity = 48/63 (76.19%), Postives = 59/63 (93.65%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF++EF+RK++KD+S N RALRRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFYT+ITRARF
Sbjct:  242 HFMEEFRRKHRKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARF 304          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.117e-22
Identity = 50/63 (79.37%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HFV+EFKRK+KKD S N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFYT+ITRARF
Sbjct:  240 HFVEEFKRKHKKDYSQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARF 302          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.459e-22
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF  EFKRK+KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDF+T+ TRARF
Sbjct:  238 HFSNEFKRKHKKDLSDNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFFTSNTRARF 300          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.905e-22
Identity = 49/64 (76.56%), Postives = 58/64 (90.62%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +H  +EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARF
Sbjct:  242 SHLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF 305          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.905e-22
Identity = 49/64 (76.56%), Postives = 58/64 (90.62%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +H  +EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARF
Sbjct:  242 SHLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF 305          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.489e-22
Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +H  +EFKRK+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARF
Sbjct:  242 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF 305          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.489e-22
Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +H  +EFKRK+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARF
Sbjct:  242 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF 305          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.489e-22
Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = -3
Query:    2 THFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 193
            +H  +EFKRK+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARF
Sbjct:  242 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF 305          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.544e-22
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF  EF+RK KKD+  +PRALRRLRTACERAKRTLSS AQTTIE+DSL+EG+DF T+ITRARF
Sbjct:  246 HFANEFQRKYKKDLKTSPRALRRLRTACERAKRTLSSAAQTTIELDSLFEGVDFATSITRARF 308          
BLAST of BG733596 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.457e-22
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = -3
Query:    2 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARF 190
            HF QEFKRK++KDI+ N RALRRLRTACERAKRTLSS+AQ  IEIDSL++GIDF +TITRARF
Sbjct:  242 HFTQEFKRKHRKDITENQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARF 304          
The following BLAST results are available for this feature:
BLAST of BG733596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
HSP76_PIG1.117e-2276.19Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HS71A_PIG1.117e-2279.37Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HSP70_CLAHE1.459e-2280.95Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP72_CAPHI1.905e-2276.56Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN1.905e-2276.56Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP72_RAT2.489e-2276.56Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE2.489e-2276.56Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN2.489e-2276.56Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_CHLRE5.544e-2277.78Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_BRELC9.457e-2279.37Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]

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Properties
Property NameValue
Genbank descriptionCs-15b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-15b similar to HSP 70, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733596 ID=BG733596; Name=BG733596; organism=Citrus sinensis; type=EST; length=204bp
CGAATCTAGCCCTTGTAATGGTTGTGTAGAAATCAATACCCTCATATAAA
GAATCAATCTCAATTGTAGTCTGTGCAGTTGATGACAGGGTCCTCTTAGC
CCTTTCACAGGCAGTTCTCAACCTCCTCAACGCTCTGGGGTTTCCACTAA
TATCCTTCTTGTTTTTCCTCTTGAACTCTTGAACAAAGTGGGTTCACCAT
TCTG
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