BG733610

Overview
NameBG733610
Unique NameBG733610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPAM_BETVU (ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris GN=ATPA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.248e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI
Sbjct:  132 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPAM_OENBI (ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis GN=ATPA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.631e-21
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVK PGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI
Sbjct:  132 EVKVPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPAM_MARPO (ATP synthase subunit alpha, mitochondrial OS=Marchantia polymorpha GN=ATPA PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.194e-21
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGII RKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI
Sbjct:  131 EVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 181          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPAM_RAPSA (ATP synthase subunit alpha, mitochondrial OS=Raphanus sativus GN=ATPA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.057e-20
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI+ERKSVHEPMQTGLKAVDSLVPIGRGQREL+IGDRQTGKT IAI
Sbjct:  132 EVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAI 182          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPAM_BRANA (ATP synthase subunit alpha, mitochondrial OS=Brassica napus GN=ATPA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.057e-20
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI+ERKSVHEPMQTGLKAVDSLVPIGRGQREL+IGDRQTGKT IAI
Sbjct:  132 EVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAI 182          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPAM_BRACM (ATP synthase subunit alpha, mitochondrial OS=Brassica campestris GN=ATPA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.057e-20
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI+ERKSVHEPMQTGLKAVDSLVPIGRGQREL+IGDRQTGKT IAI
Sbjct:  132 EVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAI 182          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_GEOUR (ATP synthase subunit alpha OS=Geobacter uraniireducens (strain Rf4) GN=atpA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.354e-20
Identity = 45/51 (88.24%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI++RKSVH+PMQTGLKA+DS+VPIGRGQRELIIGDRQTGKTA+AI
Sbjct:  130 EVKAPGIVQRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_GEOSM (ATP synthase subunit alpha OS=Geobacter sp. (strain M21) GN=atpA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.074e-20
Identity = 45/51 (88.24%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI++RKSVH+PMQTGLKA+DS+VPIGRGQRELIIGDRQTGKTA+AI
Sbjct:  130 EVKAPGIVKRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_GEOSL (ATP synthase subunit alpha OS=Geobacter sulfurreducens GN=atpA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.074e-20
Identity = 45/51 (88.24%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI++RKSVH+PMQTGLKA+DS+VPIGRGQRELIIGDRQTGKTA+AI
Sbjct:  131 EVKAPGIVKRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAI 181          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_GEOBB (ATP synthase subunit alpha OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.074e-20
Identity = 45/51 (88.24%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI++RKSVH+PMQTGLKA+DS+VPIGRGQRELIIGDRQTGKTA+AI
Sbjct:  130 EVKAPGIVKRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAVAI 180          
The following BLAST results are available for this feature:
BLAST of BG733610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPAM_BETVU1.248e-21100.00ATP synthase subunit alpha, mitochondrial OS=Beta ... [more]
ATPAM_OENBI3.631e-2198.04ATP synthase subunit alpha, mitochondrial OS=Oenot... [more]
ATPAM_MARPO6.194e-2198.04ATP synthase subunit alpha, mitochondrial OS=March... [more]
ATPAM_RAPSA1.057e-2094.12ATP synthase subunit alpha, mitochondrial OS=Rapha... [more]
ATPAM_BRANA1.057e-2094.12ATP synthase subunit alpha, mitochondrial OS=Brass... [more]
ATPAM_BRACM1.057e-2094.12ATP synthase subunit alpha, mitochondrial OS=Brass... [more]
ATPA_GEOUR2.354e-2088.24ATP synthase subunit alpha OS=Geobacter uraniiredu... [more]
ATPA_GEOSM3.074e-2088.24ATP synthase subunit alpha OS=Geobacter sp. (strai... [more]
ATPA_GEOSL3.074e-2088.24ATP synthase subunit alpha OS=Geobacter sulfurredu... [more]
ATPA_GEOBB3.074e-2088.24ATP synthase subunit alpha OS=Geobacter bemidjiens... [more]

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Properties
Property NameValue
Genbank descriptionCs-24b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-24b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733610 ID=BG733610; Name=BG733610; organism=Citrus sinensis; type=EST; length=154bp
CGAAGTGAAAGCCCCAGGGATTATTGAACGTAAATCTGTGCACGAGCCCA
TGCAAACGGGCTTAAAAGCGGTAGATAGTCTCGTTCCTATAGGCCGTGGT
CAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACTGCTATTGC
TATC
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