BG733610

Overview
NameBG733610
Unique NameBG733610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_ANADF (ATP synthase subunit alpha OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.074e-20
Identity = 44/51 (86.27%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGI++RKSVHEPMQTGLKA+D+LVPIGRGQRELI+GDRQTGKTA+AI
Sbjct:  130 EIKAPGIVQRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_ANASK (ATP synthase subunit alpha OS=Anaeromyxobacter sp. (strain K) GN=atpA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.015e-20
Identity = 44/51 (86.27%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGI++RKSVHEPMQTGLKA+D+LVPIGRGQRELI+GDRQTGKTA+AI
Sbjct:  130 EIKAPGIVKRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_ANADE (ATP synthase subunit alpha OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=atpA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.015e-20
Identity = 44/51 (86.27%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGI++RKSVHEPMQTGLKA+D+LVPIGRGQRELI+GDRQTGKTA+AI
Sbjct:  130 EIKAPGIVKRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_ANAD2 (ATP synthase subunit alpha OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=atpA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.015e-20
Identity = 44/51 (86.27%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E+KAPGI++RKSVHEPMQTGLKA+D+LVPIGRGQRELI+GDRQTGKTA+AI
Sbjct:  130 EIKAPGIVKRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_PARL1 (ATP synthase subunit alpha OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.244e-20
Identity = 46/51 (90.20%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPMQTGLKA+D+L+PIGRGQRELIIGDRQTGKTAIAI
Sbjct:  130 DVKAPGIIPRKSVHEPMQTGLKAIDALIPIGRGQRELIIGDRQTGKTAIAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_GEOSF (ATP synthase subunit alpha OS=Geobacter sp. (strain FRC-32) GN=atpA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.848e-20
Identity = 44/51 (86.27%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI++RKSVH+PMQTGLKA+D++VPIGRGQRELIIGDRQTGKTA+AI
Sbjct:  130 EVKAPGIVKRKSVHQPMQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPAM_ARATH (ATP synthase subunit alpha, mitochondrial OS=Arabidopsis thaliana GN=ATPA PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.848e-20
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI+ERKSVHEPMQTGLKAVDSLVPIGRGQREL+IG RQTGKT IAI
Sbjct:  132 EVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGKTTIAI 182          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_NOVAD (ATP synthase subunit alpha OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.944e-20
Identity = 45/51 (88.24%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGII RKSVHEP+QTGLKA+D+LVP+GRGQRELIIGDRQTGKTA+AI
Sbjct:  130 EVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_GEOMG (ATP synthase subunit alpha OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=atpA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.944e-20
Identity = 43/51 (84.31%), Postives = 51/51 (100.00%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGI++RKSVH+PMQTGLKA+D++VP+GRGQRELIIGDRQTGKTA+AI
Sbjct:  131 EVKAPGIVKRKSVHQPMQTGLKAIDAMVPVGRGQRELIIGDRQTGKTAVAI 181          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_XANP2 (ATP synthase subunit alpha OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.168e-19
Identity = 44/51 (86.27%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPMQTGLKA+D+L+PIGRGQRELIIGDRQTGKTA+A+
Sbjct:  130 DVKAPGIIPRKSVHEPMQTGLKAIDALIPIGRGQRELIIGDRQTGKTAVAL 180          
The following BLAST results are available for this feature:
BLAST of BG733610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_ANADF3.074e-2086.27ATP synthase subunit alpha OS=Anaeromyxobacter sp.... [more]
ATPA_ANASK4.015e-2086.27ATP synthase subunit alpha OS=Anaeromyxobacter sp.... [more]
ATPA_ANADE4.015e-2086.27ATP synthase subunit alpha OS=Anaeromyxobacter deh... [more]
ATPA_ANAD24.015e-2086.27ATP synthase subunit alpha OS=Anaeromyxobacter deh... [more]
ATPA_PARL15.244e-2090.20ATP synthase subunit alpha OS=Parvibaculum lavamen... [more]
ATPA_GEOSF6.848e-2086.27ATP synthase subunit alpha OS=Geobacter sp. (strai... [more]
ATPAM_ARATH6.848e-2092.16ATP synthase subunit alpha, mitochondrial OS=Arabi... [more]
ATPA_NOVAD8.944e-2088.24ATP synthase subunit alpha OS=Novosphingobium arom... [more]
ATPA_GEOMG8.944e-2084.31ATP synthase subunit alpha OS=Geobacter metallired... [more]
ATPA_XANP21.168e-1986.27ATP synthase subunit alpha OS=Xanthobacter autotro... [more]

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Properties
Property NameValue
Genbank descriptionCs-24b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-24b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733610 ID=BG733610; Name=BG733610; organism=Citrus sinensis; type=EST; length=154bp
CGAAGTGAAAGCCCCAGGGATTATTGAACGTAAATCTGTGCACGAGCCCA
TGCAAACGGGCTTAAAAGCGGTAGATAGTCTCGTTCCTATAGGCCGTGGT
CAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACTGCTATTGC
TATC
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