BG733610

Overview
NameBG733610
Unique NameBG733610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_CAUCN (ATP synthase subunit alpha OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=atpA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.797e-19
Identity = 42/51 (82.35%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEP+QTGLK++D+L+P+GRGQRELIIGDRQTGKTA+AI
Sbjct:  131 DVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVAI 181          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_YEAST (ATP synthase subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=ATP1 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 43/51 (84.31%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGI+ R+SVHEP+QTGLKAVD+LVPIGRGQRELIIGDRQTGKTA+A+
Sbjct:  167 QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVAL 217          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_WOLSU (ATP synthase subunit alpha OS=Wolinella succinogenes GN=atpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E KAPGI++RKSVHEP+QTGLKA+D+LVPIGRGQRELIIGDRQTGKT +AI
Sbjct:  128 EEKAPGIMQRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTVAI 178          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_SPHAL (ATP synthase subunit alpha OS=Sphingopyxis alaskensis GN=atpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGII R SVHEP+QTGLKA+D+LVP+GRGQRELIIGDRQTGKTA+AI
Sbjct:  130 EVKAPGIIPRTSVHEPVQTGLKALDALVPVGRGQRELIIGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RICCK (ATP synthase subunit alpha OS=Rickettsia canadensis (strain McKiel) GN=atpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGIIER SV EP+QTG+KA+DSL+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 EVKAPGIIERASVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_METS4 (ATP synthase subunit alpha OS=Methylobacterium sp. (strain 4-46) GN=atpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLK+VD+L+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 DVKAPGIIPRKSVHEPMATGLKSVDALIPIGRGQRELIIGDRQTGKTAIAL 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_METNO (ATP synthase subunit alpha OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLK+VD+L+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 DVKAPGIIPRKSVHEPMATGLKSVDALIPIGRGQRELIIGDRQTGKTAIAL 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_MAGSM (ATP synthase subunit alpha OS=Magnetococcus sp. (strain MC-1) GN=atpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 44/51 (86.27%), Postives = 48/51 (94.12%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            EVKAPGII RKSVHEP+ TG+KA+D LVPIGRGQRELIIGDRQTGKTA+AI
Sbjct:  130 EVKAPGIIPRKSVHEPLHTGIKALDGLVPIGRGQRELIIGDRQTGKTAVAI 180          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_ARTAT (ATP synthase subunit alpha OS=Arthrobacter aurescens (strain TC1) GN=atpA PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 7.572e-19
Identity = 41/51 (80.39%), Postives = 50/51 (98.04%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E++APG+ ERKSVHEPMQTGLKA+D+++PIGRGQR+LIIGDRQTGKTAIA+
Sbjct:  134 ELQAPGVTERKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKTAIAV 184          
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RHOPA (ATP synthase subunit alpha OS=Rhodopseudomonas palustris GN=atpA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.889e-19
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 2
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLK++D+L+PIGRGQRELIIGDRQTGKTAIA+
Sbjct:  130 DVKAPGIIPRKSVHEPMATGLKSIDALIPIGRGQRELIIGDRQTGKTAIAL 180          
The following BLAST results are available for this feature:
BLAST of BG733610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_CAUCN5.797e-1982.35ATP synthase subunit alpha OS=Caulobacter crescent... [more]
ATPA_YEAST7.572e-1984.31ATP synthase subunit alpha, mitochondrial OS=Sacch... [more]
ATPA_WOLSU7.572e-1984.31ATP synthase subunit alpha OS=Wolinella succinogen... [more]
ATPA_SPHAL7.572e-1986.27ATP synthase subunit alpha OS=Sphingopyxis alasken... [more]
ATPA_RICCK7.572e-1986.27ATP synthase subunit alpha OS=Rickettsia canadensi... [more]
ATPA_METS47.572e-1986.27ATP synthase subunit alpha OS=Methylobacterium sp.... [more]
ATPA_METNO7.572e-1986.27ATP synthase subunit alpha OS=Methylobacterium nod... [more]
ATPA_MAGSM7.572e-1986.27ATP synthase subunit alpha OS=Magnetococcus sp. (s... [more]
ATPA_ARTAT7.572e-1980.39ATP synthase subunit alpha OS=Arthrobacter auresce... [more]
ATPA_RHOPA9.889e-1984.31ATP synthase subunit alpha OS=Rhodopseudomonas pal... [more]

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Properties
Property NameValue
Genbank descriptionCs-24b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-24b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733610 ID=BG733610; Name=BG733610; organism=Citrus sinensis; type=EST; length=154bp
CGAAGTGAAAGCCCCAGGGATTATTGAACGTAAATCTGTGCACGAGCCCA
TGCAAACGGGCTTAAAAGCGGTAGATAGTCTCGTTCCTATAGGCCGTGGT
CAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACTGCTATTGC
TATC
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