BG733610

Overview
NameBG733610
Unique NameBG733610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RHIEC (ATP synthase subunit alpha OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAILL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_RHIE6 (ATP synthase subunit alpha OS=Rhizobium etli (strain CIAT 652) GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAILL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_HELMI (ATP synthase subunit alpha OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 49/51 (96.08%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            E  APG+I+RKSVHEP+QTGLKA+D++VPIGRGQRELIIGDRQTGKTA+A+
Sbjct:  130 ESPAPGVIKRKSVHEPLQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAV 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BRUSU (ATP synthase subunit alpha OS=Brucella suis GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BRUSI (ATP synthase subunit alpha OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BRUO2 (ATP synthase subunit alpha OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BRUME (ATP synthase subunit alpha OS=Brucella melitensis GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BRUMB (ATP synthase subunit alpha OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BRUC2 (ATP synthase subunit alpha OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
[Close]
BLAST of BG733610 vs. ExPASy Swiss-Prot
Match: ATPA_BRUAB (ATP synthase subunit alpha OS=Brucella abortus GN=atpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.203e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 2 
Query:    2 EVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 154
            +VKAPGII RKSVHEPM TGLKA+D+L+P+GRGQREL+IGDRQTGKTAI +
Sbjct:  130 DVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIIL 180
The following BLAST results are available for this feature:
BLAST of BG733610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPA_RHIEC2.203e-1880.39ATP synthase subunit alpha OS=Rhizobium etli (stra... [more]
ATPA_RHIE62.203e-1880.39ATP synthase subunit alpha OS=Rhizobium etli (stra... [more]
ATPA_HELMI2.203e-1880.39ATP synthase subunit alpha OS=Heliobacterium modes... [more]
ATPA_BRUSU2.203e-1880.39ATP synthase subunit alpha OS=Brucella suis GN=atp... [more]
ATPA_BRUSI2.203e-1880.39ATP synthase subunit alpha OS=Brucella suis (strai... [more]
ATPA_BRUO22.203e-1880.39ATP synthase subunit alpha OS=Brucella ovis (strai... [more]
ATPA_BRUME2.203e-1880.39ATP synthase subunit alpha OS=Brucella melitensis ... [more]
ATPA_BRUMB2.203e-1880.39ATP synthase subunit alpha OS=Brucella melitensis ... [more]
ATPA_BRUC22.203e-1880.39ATP synthase subunit alpha OS=Brucella canis (stra... [more]
ATPA_BRUAB2.203e-1880.39ATP synthase subunit alpha OS=Brucella abortus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCs-24b Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-24b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG733610 ID=BG733610; Name=BG733610; organism=Citrus sinensis; type=EST; length=154bp
CGAAGTGAAAGCCCCAGGGATTATTGAACGTAAATCTGTGCACGAGCCCA
TGCAAACGGGCTTAAAAGCGGTAGATAGTCTCGTTCCTATAGGCCGTGGT
CAACGAGAACTTATAATCGGGGACCGACAAACTGGAAAAACTGCTATTGC
TATC
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