BG791315

Overview
NameBG791315
Unique NameBG791315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10367 contig Csv1_Contig10367:586..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_HERA2 (Formate--tetrahydrofolate ligase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=fhs PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.080e-20
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            GF  LPICMAKT  S SH+ A KGAPTG+  PIR+VRASIGAGFIYP+ G M TMPGL   P   +ID+
Sbjct:  492 GFGNLPICMAKTHLSISHDPALKGAPTGYSFPIREVRASIGAGFIYPIAGDMMTMPGLSANPAAQQIDI 560          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_ROSS1 (Formate--tetrahydrofolate ligase OS=Roseiflexus sp. (strain RS-1) GN=fhs PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.448e-19
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 2
Query:   17 QGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            QG+  LPICMAKTQ S SH+   +GAP+G++ PIR+VR + GAGFIYPL G + TMPGLP  P    ID+
Sbjct:  485 QGYGALPICMAKTQLSISHDPKLRGAPSGYVFPIREVRLAAGAGFIYPLAGDIRTMPGLPAHPAAERIDI 554          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: C1TM_SCHPO (C-1-tetrahydrofolate synthase, mitochondrial OS=Schizosaccharomyces pombe GN=ade9 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.448e-19
Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 2
Query:   17 QGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            QGF  LPICMAKTQYS SHN   +  P  F +PIRD+R + GAGFIYPL   + T+PGLPT P +  ID+
Sbjct:  890 QGFGNLPICMAKTQYSLSHNPEFRNVPKNFTVPIRDMRLNAGAGFIYPLAAEIQTIPGLPTAPAYLNIDI 959          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_ROSCS (Formate--tetrahydrofolate ligase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.809e-19
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 2
Query:   17 QGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            QG+  LPICMAKT  S SH+   +GAP+G++ PIRDVR + GAGFIYPL G + TMPGLP  P    ID+
Sbjct:  485 QGYGNLPICMAKTHLSISHDPKLRGAPSGYVFPIRDVRLAAGAGFIYPLAGDIRTMPGLPAHPAAERIDI 554          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_DESRM (Formate--tetrahydrofolate ligase OS=Desulfotomaculum reducens (strain MI-1) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            G   LPICMAKT  S SH+ A KG P  +I PIRD+RAS+GAGF+YPL G M TMPGL ++P  + +D+
Sbjct:  489 GLGHLPICMAKTHLSISHDPAMKGLPKNYIFPIRDIRASVGAGFLYPLAGAMRTMPGLGSKPAAHNVDI 557          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACHK (Formate--tetrahydrofolate ligase OS=Bacillus thuringiensis subsp. konkukian GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACCZ (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain ZK / E33L) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACCQ (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain Q1) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACC7 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain AH187) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACC3 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain 03BB102) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
The following BLAST results are available for this feature:
BLAST of BG791315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
FTHS_HERA23.080e-2065.22Formate--tetrahydrofolate ligase OS=Herpetosiphon ... [more]
FTHS_ROSS14.448e-1958.57Formate--tetrahydrofolate ligase OS=Roseiflexus sp... [more]
C1TM_SCHPO4.448e-1958.57C-1-tetrahydrofolate synthase, mitochondrial OS=Sc... [more]
FTHS_ROSCS5.809e-1958.57Formate--tetrahydrofolate ligase OS=Roseiflexus ca... [more]
FTHS_DESRM9.909e-1957.97Formate--tetrahydrofolate ligase OS=Desulfotomacul... [more]
FTHS_BACHK9.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus thuri... [more]
FTHS_BACCZ9.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]
FTHS_BACCQ9.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]
FTHS_BACC79.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]
FTHS_BACC39.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]

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Properties
Property NameValue
Genbank descriptionCs-31d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-31d, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG791315 ID=BG791315; Name=BG791315; organism=Citrus sinensis; type=EST; length=226bp
CGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATTTGCATGGCAA
AAACCCAGTATTCATTTTCACACAATGCCGCCGAGAAGGGAGCCCCAACT
GGGTTTATCTTACCGATAAGGGATGTAAGAGCTAGCATTGGGGCTGGATT
CATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGGTCTCCCAACAA
GGCCATGCTTTTACGAGATTGATGTC
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