BG791315

Overview
NameBG791315
Unique NameBG791315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10367 contig Csv1_Contig10367:586..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACC0 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain AH820) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACAN (Formate--tetrahydrofolate ligase OS=Bacillus anthracis GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACAH (Formate--tetrahydrofolate ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=fhs PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACAC (Formate--tetrahydrofolate ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACAA (Formate--tetrahydrofolate ligase OS=Bacillus anthracis (strain A0248) GN=fhs PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.909e-19
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LPICMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACC2 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain G9842) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.294e-18
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LP+CMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPVCMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACC1 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain ATCC 10987) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.294e-18
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LP+CMAKTQYS S +A + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPVCMAKTQYSLSDDATKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: C1TC_YEAST (C-1-tetrahydrofolate synthase, cytoplasmic OS=Saccharomyces cerevisiae GN=ADE3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.207e-18
Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 2
Query:    2 EMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            +MY  QGF  LPIC+AKTQYS SH+A  KG PTGF  PIRDVR S GAG++Y L   + T+PGL T   +  ++V
Sbjct:  862 DMYKEQGFGNLPICIAKTQYSLSHDATLKGVPTGFTFPIRDVRLSNGAGYLYALAAEIQTIPGLATYAGYMAVEV 936          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_BACCR (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=fhs PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.765e-18
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y G+G+S LP+CMAKTQYS S +  + G P+ FI+ IR+++ SIGAGFI  L GTM TMPGLP +P   ++DV
Sbjct:  480 YEGEGWSNLPVCMAKTQYSLSDDVTKLGRPSDFIVTIRELKPSIGAGFIVALTGTMLTMPGLPKQPAALQMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: C1TC_SPOFR (C-1-tetrahydrofolate synthase, cytoplasmic OS=Spodoptera frugiperda PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 3.765e-18
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            +T  G+   PICMAKT  S + + A KGAPTGF L I  + AS+GAGF+ P+VG +S MPGLPTRP  Y+ID+
Sbjct:  850 FTDMGYDKFPICMAKTSNSLTGDPAVKGAPTGFTLKINGIFASVGAGFVVPMVGEISKMPGLPTRPSIYDIDL 922          
The following BLAST results are available for this feature:
BLAST of BG791315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
FTHS_BACC09.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]
FTHS_BACAN9.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus anthr... [more]
FTHS_BACAH9.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus thuri... [more]
FTHS_BACAC9.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus anthr... [more]
FTHS_BACAA9.909e-1958.90Formate--tetrahydrofolate ligase OS=Bacillus anthr... [more]
FTHS_BACC21.294e-1857.53Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]
FTHS_BACC11.294e-1857.53Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]
C1TC_YEAST2.207e-1856.00C-1-tetrahydrofolate synthase, cytoplasmic OS=Sacc... [more]
FTHS_BACCR3.765e-1856.16Formate--tetrahydrofolate ligase OS=Bacillus cereu... [more]
C1TC_SPOFR3.765e-1856.16C-1-tetrahydrofolate synthase, cytoplasmic OS=Spod... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCs-31d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-31d, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG791315 ID=BG791315; Name=BG791315; organism=Citrus sinensis; type=EST; length=226bp
CGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATTTGCATGGCAA
AAACCCAGTATTCATTTTCACACAATGCCGCCGAGAAGGGAGCCCCAACT
GGGTTTATCTTACCGATAAGGGATGTAAGAGCTAGCATTGGGGCTGGATT
CATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGGTCTCCCAACAA
GGCCATGCTTTTACGAGATTGATGTC
back to top