BG791315

Overview
NameBG791315
Unique NameBG791315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10367 contig Csv1_Contig10367:586..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS2_RUBXD (Formate--tetrahydrofolate ligase 2 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=fhs2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.524e-16
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:    2 EMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            E +   GF  LP+C+AKT  S S + A KGAP G+ L +R+VRAS+GAGFIYP+ G M TMPGL   P    ID+
Sbjct:  492 EGFERAGFGRLPVCLAKTHLSLSSDPALKGAPRGWKLSVREVRASVGAGFIYPICGQMRTMPGLSAHPAAERIDL 566          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS1_RUBXD (Formate--tetrahydrofolate ligase 1 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=fhs1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.524e-16
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:    2 EMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            E +   GF  LP+C+AKT  S S + A KGAP G+ L +R+VRAS+GAGFIYP+ G M TMPGL   P    ID+
Sbjct:  492 EGFERAGFGRLPVCLAKTHLSLSSDPALKGAPRGWKLSVREVRASVGAGFIYPICGQMRTMPGLSAHPAAERIDL 566          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_PARDP (Formate--tetrahydrofolate ligase OS=Paracoccus denitrificans (strain Pd 1222) GN=fhs1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16
Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 2
Query:    2 EMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            E +   G   LP+CMAKTQYSFS N A  GAP GF +P+R+VR + GAGF+  + G + TMPGLP  P    I V
Sbjct:  471 EEWQAAGHGHLPVCMAKTQYSFSANPAALGAPEGFTIPVREVRLAAGAGFVVAICGDIMTMPGLPREPSALRIGV 545          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_ZYMMO (Formate--tetrahydrofolate ligase OS=Zymomonas mobilis GN=fhs PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-16
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:   17 QGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            QGF  LP+C+AKTQ SFS +   K APTG I PIR+VR + GAGFI  + G + TMPGLP  P    ID+
Sbjct:  478 QGFGDLPVCIAKTQSSFSADPKAKNAPTGHIFPIREVRLNAGAGFIVAISGNIMTMPGLPRHPAAENIDI 547          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_MOOTA (Formate--tetrahydrofolate ligase OS=Moorella thermoacetica (strain ATCC 39073) GN=fhs PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-16
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2
Query:    2 EMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            + Y   G+  LP+ MAKTQYSFS +  + G P  F + +R+VR S GAGFI P+ G + TMPGLP RP    ID+
Sbjct:  475 QRYESLGYGNLPVVMAKTQYSFSDDMTKLGRPRNFTITVREVRLSAGAGFIVPITGAIMTMPGLPKRPAACNIDI 549          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: C1TC_DROME (C-1-tetrahydrofolate synthase, cytoplasmic OS=Drosophila melanogaster GN=pug PE=1 SV=4)

HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-16
Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 2
Query:   11 TGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            T  GF  LPICM+K   SF+ +A  KGAP GF L + DV  S GAGF+  + G ++ MPGLPTRP  Y+ID+
Sbjct:  886 TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPGLPTRPAIYDIDL 957          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_STAHJ (Formate--tetrahydrofolate ligase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=fhs PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            +T  G+   PICMAKTQYSFS +A   GAPT F + IR++ A  GAGFI  L G + TMPGLP +P    +DV
Sbjct:  473 FTDNGWGQYPICMAKTQYSFSDDATALGAPTDFDITIRELEAKTGAGFIVALTGAIMTMPGLPKKPAALNMDV 545          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_NOCSJ (Formate--tetrahydrofolate ligase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=fhs PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            G+  LP+C+AKTQYSFS +    GAPTG  L +R+VR S GAGF+  + G M TMPGLPTRP    ID+
Sbjct:  481 GYGTLPVCVAKTQYSFSTDPGLLGAPTGHELRVREVRLSAGAGFVVVICGDMMTMPGLPTRPAATRIDL 549          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_ELUMP (Formate--tetrahydrofolate ligase OS=Elusimicrobium minutum (strain Pei191) GN=fhs PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 2
Query:    8 YTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            Y   GF  +P+CMAKTQYSFS N    G P GF + +R+ R S GAGF+  L G + TMPGLP  P   +ID+
Sbjct:  474 YEAMGFGNIPVCMAKTQYSFSDNPKLYGRPEGFTIEVREARISAGAGFVVMLTGNIMTMPGLPKFPAAEKIDI 546          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_RHOSK (Formate--tetrahydrofolate ligase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=fhs PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRP 205
            G+  LP+CMAKTQYSF+ +AA +GAP G  +PIR+VR + GAGF+  + G + TMPGLP++P
Sbjct:  479 GYGALPVCMAKTQYSFTTDAAIRGAPEGHSIPIREVRLAAGAGFVVAICGEIRTMPGLPSQP 540          
The following BLAST results are available for this feature:
BLAST of BG791315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
FTHS2_RUBXD3.524e-1653.33Formate--tetrahydrofolate ligase 2 OS=Rubrobacter ... [more]
FTHS1_RUBXD3.524e-1653.33Formate--tetrahydrofolate ligase 1 OS=Rubrobacter ... [more]
FTHS_PARDP4.603e-1652.00Formate--tetrahydrofolate ligase OS=Paracoccus den... [more]
FTHS_ZYMMO7.851e-1655.71Formate--tetrahydrofolate ligase OS=Zymomonas mobi... [more]
FTHS_MOOTA7.851e-1649.33Formate--tetrahydrofolate ligase OS=Moorella therm... [more]
C1TC_DROME7.851e-1652.78C-1-tetrahydrofolate synthase, cytoplasmic OS=Dros... [more]
FTHS_STAHJ1.025e-1553.42Formate--tetrahydrofolate ligase OS=Staphylococcus... [more]
FTHS_NOCSJ1.025e-1556.52Formate--tetrahydrofolate ligase OS=Nocardioides s... [more]
FTHS_ELUMP1.025e-1550.68Formate--tetrahydrofolate ligase OS=Elusimicrobium... [more]
FTHS_RHOSK1.749e-1556.45Formate--tetrahydrofolate ligase OS=Rhodobacter sp... [more]

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Properties
Property NameValue
Genbank descriptionCs-31d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-31d, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG791315 ID=BG791315; Name=BG791315; organism=Citrus sinensis; type=EST; length=226bp
CGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATTTGCATGGCAA
AAACCCAGTATTCATTTTCACACAATGCCGCCGAGAAGGGAGCCCCAACT
GGGTTTATCTTACCGATAAGGGATGTAAGAGCTAGCATTGGGGCTGGATT
CATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGGTCTCCCAACAA
GGCCATGCTTTTACGAGATTGATGTC
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