BG791315

Overview
NameBG791315
Unique NameBG791315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10367 contig Csv1_Contig10367:586..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS2_STRP6 (Formate--tetrahydrofolate ligase 2 OS=Streptococcus pyogenes serotype M6 GN=fhs2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.284e-15
Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            GF   PICMAKTQYSFS +A + GAPT FI+ I +++ S GAGFI  L G + TMPGLP  P    ID+
Sbjct:  479 GFGNYPICMAKTQYSFSDDAKKLGAPTDFIVTISNLKVSAGAGFIVALTGAIMTMPGLPKVPASETIDI 547          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_SYMTH (Formate--tetrahydrofolate ligase OS=Symbiobacterium thermophilum GN=fhs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 2
Query:   17 QGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            +GF   P+C+AKTQYSFS +  + GAPTG+ L +R+VR S GAGF+  L G + TMPGLP  P    IDV
Sbjct:  477 EGFGRAPVCIAKTQYSFSDDPKKLGAPTGWRLTVREVRPSAGAGFVVALTGEIMTMPGLPPVPAAESIDV 546          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_SINMW (Formate--tetrahydrofolate ligase OS=Sinorhizobium medicae (strain WSM419) GN=fhs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 2
Query:    5 MYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRP 205
            ++  QG+  LPICMAKTQYSFS +   +GAPTG  +PIR+VR + GAGFI  + G + TMPGLP  P
Sbjct:  484 IWEDQGYGHLPICMAKTQYSFSTDPNLRGAPTGHTVPIREVRLAAGAGFIVVITGEIMTMPGLPKVP 550          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_RHIME (Formate--tetrahydrofolate ligase OS=Rhizobium meliloti GN=fhs PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 2
Query:   17 QGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRP 205
            QG+  LPICMAKTQYSFS +   +GAPTG  +PIR+VR + GAGFI  + G + TMPGLP  P
Sbjct:  480 QGYGDLPICMAKTQYSFSTDPNLRGAPTGHAVPIREVRLAAGAGFIVVITGEIMTMPGLPKVP 542          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_HALOH (Formate--tetrahydrofolate ligase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=fhs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 2
Query:    2 EMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            + YT  G+  LPICMAKTQ S S + + KG P GF + +R+V  S GAGFI PL G + TMPGLP +P    ID+
Sbjct:  470 DKYTELGYDKLPICMAKTQSSISDDPSLKGRPRGFRINVREVNLSAGAGFIIPLTGPVLTMPGLPKKPAAEGIDI 544          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_ARTS2 (Formate--tetrahydrofolate ligase OS=Arthrobacter sp. (strain FB24) GN=fhs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            G++G+P+CMAKTQYSFS +A   GAP GF + +RD+    GAGFI  L G + TMPGLP  P    +DV
Sbjct:  487 GWAGMPVCMAKTQYSFSDDATRLGAPKGFTVHVRDLIPKTGAGFIVALTGAVMTMPGLPKVPAALRMDV 555          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_ARTAT (Formate--tetrahydrofolate ligase OS=Arthrobacter aurescens (strain TC1) GN=fhs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            G+SGLP+CMAKTQYSF+ +A+  GAP GF + +R++    GAGFI  L G + TMPGLP  P    +DV
Sbjct:  484 GWSGLPVCMAKTQYSFTDDASRLGAPKGFRVHVRELIPKTGAGFIVALTGAVMTMPGLPKEPAAMRMDV 552          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS1_STRSV (Formate--tetrahydrofolate ligase 1 OS=Streptococcus sanguinis (strain SK36) GN=fhs1 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15
Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            GFS  PICMAKTQYSFS +A + GAP  F++ I  ++ S GAGFI  L G + TMPGLP  P   +IDV
Sbjct:  479 GFSNYPICMAKTQYSFSDDAKKLGAPKDFVVTISQLKVSAGAGFIVALTGAIMTMPGLPKVPASEKIDV 547          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_VIBVY (Formate--tetrahydrofolate ligase OS=Vibrio vulnificus (strain YJ016) GN=fhs PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.897e-15
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 2
Query:    5 MYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            +Y   GF  L +CMAKT  S S +++ KGAP+GF + +R+VR   GAGF+Y L G + TMPGLP  P F  +D+
Sbjct:  499 LYQTLGFGELAVCMAKTPLSISSDSSLKGAPSGFTIMVREVRLCAGAGFVYALTGNVMTMPGLPDIPAFMALDI 572          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_VIBVU (Formate--tetrahydrofolate ligase OS=Vibrio vulnificus GN=fhs PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.897e-15
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 2
Query:    5 MYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            +Y   GF  L +CMAKT  S S +++ KGAP+GF + +R+VR   GAGF+Y L G + TMPGLP  P F  +D+
Sbjct:  499 LYQTLGFGELAVCMAKTPLSISSDSSLKGAPSGFTIMVREVRLCAGAGFVYALTGNVMTMPGLPDIPAFMALDI 572          
The following BLAST results are available for this feature:
BLAST of BG791315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
FTHS2_STRP62.284e-1556.52Formate--tetrahydrofolate ligase 2 OS=Streptococcu... [more]
FTHS_SYMTH2.983e-1554.29Formate--tetrahydrofolate ligase OS=Symbiobacteriu... [more]
FTHS_SINMW2.983e-1556.72Formate--tetrahydrofolate ligase OS=Sinorhizobium ... [more]
FTHS_RHIME2.983e-1560.32Formate--tetrahydrofolate ligase OS=Rhizobium meli... [more]
FTHS_HALOH2.983e-1552.00Formate--tetrahydrofolate ligase OS=Halothermothri... [more]
FTHS_ARTS22.983e-1553.62Formate--tetrahydrofolate ligase OS=Arthrobacter s... [more]
FTHS_ARTAT2.983e-1553.62Formate--tetrahydrofolate ligase OS=Arthrobacter a... [more]
FTHS1_STRSV2.983e-1556.52Formate--tetrahydrofolate ligase 1 OS=Streptococcu... [more]
FTHS_VIBVY3.897e-1548.65Formate--tetrahydrofolate ligase OS=Vibrio vulnifi... [more]
FTHS_VIBVU3.897e-1548.65Formate--tetrahydrofolate ligase OS=Vibrio vulnifi... [more]

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Properties
Property NameValue
Genbank descriptionCs-31d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-31d, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG791315 ID=BG791315; Name=BG791315; organism=Citrus sinensis; type=EST; length=226bp
CGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATTTGCATGGCAA
AAACCCAGTATTCATTTTCACACAATGCCGCCGAGAAGGGAGCCCCAACT
GGGTTTATCTTACCGATAAGGGATGTAAGAGCTAGCATTGGGGCTGGATT
CATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGGTCTCCCAACAA
GGCCATGCTTTTACGAGATTGATGTC
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