BG791315

Overview
NameBG791315
Unique NameBG791315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10367 contig Csv1_Contig10367:586..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_VIBF1 (Formate--tetrahydrofolate ligase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fhs PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.897e-15
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            G+  L +CMAKT  S S +   KGAPT FI+PIR+++   GAGFIY L G + TMPGLP +P F  +D+
Sbjct:  504 GYQSLSVCMAKTPASISTDGNIKGAPTDFIVPIRELKLCAGAGFIYALCGNVMTMPGLPEKPAFMNLDI 572          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_VIBHB (Formate--tetrahydrofolate ligase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=fhs PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            GF  L +C+AKT  S + ++A KGAP+GF +PIR++R   GAGF+Y L G + TMPGLP +P F  +D+
Sbjct:  504 GFDDLAVCIAKTPLSITTDSAIKGAPSGFAVPIRELRLCAGAGFVYALSGNVMTMPGLPDKPTFMNLDL 572          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_VIBFM (Formate--tetrahydrofolate ligase OS=Vibrio fischeri (strain MJ11) GN=fhs PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            G+  L +CMAKT  S S +   KGAPT F++PIR+++   GAGFIY L G + TMPGLP +P F  +D+
Sbjct:  504 GYQSLSVCMAKTPASISTDGNIKGAPTDFVVPIRELKLCAGAGFIYALCGNVMTMPGLPEKPAFMNLDI 572          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_SILPO (Formate--tetrahydrofolate ligase OS=Silicibacter pomeroyi GN=fhs1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRP 205
            G+  LP+CMAKTQYSF+ +   +GAPTG  +P+R+VR S GAGFI  + G + TMPGLP +P
Sbjct:  480 GYRNLPVCMAKTQYSFTTDPNRRGAPTGHSVPVREVRLSAGAGFIVVVCGEIMTMPGLPRKP 541          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_ROSDO (Formate--tetrahydrofolate ligase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=fhs PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 2
Query:    2 EMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRP 205
            +++  QG+  LP+CMAKTQYSFS +   +GAPTG  +P+R+VR S GAGF+  + G + TMPGLP  P
Sbjct:  474 KLWEEQGYGHLPVCMAKTQYSFSTDPNLRGAPTGHSVPVREVRLSAGAGFVVVVCGEIMTMPGLPRVP 541          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_CARHZ (Formate--tetrahydrofolate ligase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=fhs PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            GF  +P+ MAKTQYS S +  + G PTGF + +R++RAS+GAGFI  + G + TMPGLP RP    ID+
Sbjct:  478 GFGNMPVIMAKTQYSLSDDPNKLGRPTGFNITVRELRASVGAGFIVAITGDIMTMPGLPKRPAAEVIDI 546          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_STRMU (Formate--tetrahydrofolate ligase OS=Streptococcus mutans GN=fhs PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.646e-15
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            G+  LPICMAKTQYSFS +    GAPTGF + IR++   +GAGFI  L G + TMPGLP +P    +DV
Sbjct:  478 GWDNLPICMAKTQYSFSDDPKLLGAPTGFDITIRELVPKLGAGFIVALTGDVMTMPGLPKKPAALNMDV 546          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_EUBAC (Formate--tetrahydrofolate ligase OS=Eubacterium acidaminophilum GN=fhs PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.646e-15
Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            GF  LPIC+AKTQYSFS N   KGAP GF + + + R S GAGFI  L G + TMPGLP  P    +DV
Sbjct:  478 GFGNLPICVAKTQYSFSDNPNLKGAPKGFTVSVSNARISAGAGFIVVLTGDIMTMPGLPKVPAANHMDV 546          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_VIBPA (Formate--tetrahydrofolate ligase OS=Vibrio parahaemolyticus GN=fhs PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.681e-15
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 2
Query:   20 GFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDV 226
            GF+ L +C+AKT  S + +++ KGAP GF +PIR++R   GAGF+Y L G++ TMPGLP +P F  +D+
Sbjct:  504 GFNELAVCIAKTPLSVTTDSSVKGAPVGFTVPIRELRLCAGAGFVYALSGSVMTMPGLPDKPAFMNLDL 572          
BLAST of BG791315 vs. ExPASy Swiss-Prot
Match: FTHS_RHILW (Formate--tetrahydrofolate ligase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=fhs PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.681e-15
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 2
Query:   17 QGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRP 205
            QG+  LP+CMAKTQYSFS + + +GAP G I+ +R+VR S GAGF+  + G + TMPGLP  P
Sbjct:  480 QGYGKLPVCMAKTQYSFSTDPSLRGAPEGHIVTVREVRLSAGAGFVVAITGEIMTMPGLPKSP 542          
The following BLAST results are available for this feature:
BLAST of BG791315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
FTHS_VIBF13.897e-1552.17Formate--tetrahydrofolate ligase OS=Vibrio fischer... [more]
FTHS_VIBHB5.089e-1550.72Formate--tetrahydrofolate ligase OS=Vibrio harveyi... [more]
FTHS_VIBFM5.089e-1550.72Formate--tetrahydrofolate ligase OS=Vibrio fischer... [more]
FTHS_SILPO5.089e-1556.45Formate--tetrahydrofolate ligase OS=Silicibacter p... [more]
FTHS_ROSDO5.089e-1552.94Formate--tetrahydrofolate ligase OS=Roseobacter de... [more]
FTHS_CARHZ5.089e-1552.17Formate--tetrahydrofolate ligase OS=Carboxydotherm... [more]
FTHS_STRMU6.646e-1555.07Formate--tetrahydrofolate ligase OS=Streptococcus ... [more]
FTHS_EUBAC6.646e-1556.52Formate--tetrahydrofolate ligase OS=Eubacterium ac... [more]
FTHS_VIBPA8.681e-1549.28Formate--tetrahydrofolate ligase OS=Vibrio parahae... [more]
FTHS_RHILW8.681e-1555.56Formate--tetrahydrofolate ligase OS=Rhizobium legu... [more]

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Properties
Property NameValue
Genbank descriptionCs-31d Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-31d, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG791315 ID=BG791315; Name=BG791315; organism=Citrus sinensis; type=EST; length=226bp
CGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATTTGCATGGCAA
AAACCCAGTATTCATTTTCACACAATGCCGCCGAGAAGGGAGCCCCAACT
GGGTTTATCTTACCGATAAGGGATGTAAGAGCTAGCATTGGGGCTGGATT
CATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGGTCTCCCAACAA
GGCCATGCTTTTACGAGATTGATGTC
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