BQ622912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB2_CAEEL (Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 7.416e-75 Identity = 129/154 (83.77%), Postives = 146/154 (94.81%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPL+++G+Q YRALTV ELTQQM+DAKNMM A DPRHGRYLT +AMFRG+MS +EVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB6_BOVIN (Tubulin beta-6 chain OS=Bos taurus GN=TUBB6 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.265e-74 Identity = 130/154 (84.42%), Postives = 145/154 (94.16%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPLT+RGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG MS KEVDEQM+ +QNKNSSYFVEWIPNNVK +VCDIPPRGL M++TFIGNST+IQE+F+R+SEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB1_ECHMU (Tubulin beta-1 chain OS=Echinococcus multilocularis GN=TUB-1 PE=3 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 2.158e-74 Identity = 130/154 (84.42%), Postives = 143/154 (92.86%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPLTSRGSQQYR LTV ELTQQM+DAKNMM A DPRHGRYLT +AMFRG+MS KEVD+QM+N QNKNSSYFVEWIPNNVK++VCDIPPRGL M+ TF+GN+T+IQE+F+RVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLTSRGSQQYRVLTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDDQMLNAQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSVTFMGNTTAIQEIFKRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB6_HUMAN (Tubulin beta-6 chain OS=Homo sapiens GN=TUBB6 PE=1 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 2.818e-74 Identity = 130/154 (84.42%), Postives = 144/154 (93.51%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPLTSRGSQQYRALTVPELTQQM+DA+NMM A DPRHGRYLT + +FRG MS KEVDEQM+ +Q+KNSSYFVEWIPNNVK +VCDIPPRGL MASTFIGNST+IQE+F+R+SEQF+AMFRRKAFLHW+TGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB8_PANTR (Tubulin beta-8 chain OS=Pan troglodytes GN=TUBB8 PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 4.807e-74 Identity = 128/154 (83.12%), Postives = 145/154 (94.16%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPLTSRGSQQYRALTV ELTQQM+DAKNMM A DPRHGRYLTA+A+FRG+M +EVDEQM N+Q+KNSSYF +W+PNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB8_HUMAN (Tubulin beta-8 chain OS=Homo sapiens GN=TUBB8 PE=1 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 4.807e-74 Identity = 128/154 (83.12%), Postives = 145/154 (94.16%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPLTSRGSQQYRALTV ELTQQM+DAKNMM A DPRHGRYLTA+A+FRG+M +EVDEQM N+Q+KNSSYF +W+PNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB_ONCGI (Tubulin beta chain OS=Onchocerca gibsoni GN=TBB PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 6.278e-74 Identity = 128/154 (83.12%), Postives = 146/154 (94.81%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPLTSR +QQYRA+TV ELTQQ++DAKNMM A DPRHGRYLTA+A+FRG+MS K+VDEQM+N+QNKNS+YFV+WIPNNVK++VCDIPPR L MA+TFIGNST+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLTSRSNQQYRAVTVAELTQQLFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKDVDEQMLNIQNKNSAYFVDWIPNNVKTAVCDIPPRDLKMAATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 8.199e-74 Identity = 130/155 (83.87%), Postives = 145/155 (93.55%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYR-ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM+GFAPLTSRGSQ+YR L+V ++TQQM+DAKNMM AADPRHGRYLTASA+FRG+MSTKEVDEQM+NVQNKNSSYF+EWIPNN+KSS+CDIPP+GL M+ TFIGN+T IQEMFRRV EQFT MFRRK FLHWYTGEGMDEMEFTEAESNMN Sbjct: 264 LHFFMMGFAPLTSRGSQEYRQGLSVADVTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPPKGLKMSVTFIGNNTCIQEMFRRVGEQFTGMFRRKRFLHWYTGEGMDEMEFTEAESNMN 418
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB8_PAPHA (Tubulin beta-8 chain OS=Papio hamadryas GN=TUBB8 PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 1.071e-73 Identity = 127/154 (82.47%), Postives = 145/154 (94.16%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 LHFFM GFAPLTSRGSQQYRALTV ELTQQM+DA+NMM A DPRHGRYLTA+A+FRG+M +EVDEQM N+QNKNSSYF +W+P+NVK++VCDIPPRGL M++TFIGN+T+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN Sbjct: 263 LHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDARNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQNKNSSYFADWLPHNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBB_LYTPI (Tubulin beta chain (Fragment) OS=Lytechinus pictus PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 6.941e-73 Identity = 128/147 (87.07%), Postives = 141/147 (95.92%), Query Frame = 2 Query: 23 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 463 FAPLTSRGSQQYRALTV ELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN Sbjct: 1 FAPLTSRGSQQYRALTVSELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 147 The following BLAST results are available for this feature:
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622912 ID=BQ622912; Name=BQ622912; organism=Citrus sinensis; type=EST; length=464bpback to top |