BQ622912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.957e-23 Identity = 51/161 (31.68%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP + A + N+T+I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ Sbjct: 265 IHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA3_CHICK (Tubulin alpha-3 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.588e-23 Identity = 50/161 (31.06%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + +A + S + L+VPE+T ++ N M DPR G+Y+ ++RG + K+V+ + ++ + S FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 140 IHFPLTTYARIISAEKAYHEQLSVPEITNACFEFSNQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIAAIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 300
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.468e-22 Identity = 51/161 (31.68%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR---GLSMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF M FAP+ S + +V ++T +++ N + DPR G+Y+ ++RG + KEV+ + ++++S FV+W P K + + PP G +A + N+T+I E + R+ +F M+ ++AFLHWY EGM+E EF EA ++ Sbjct: 272 IHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDL 432
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.269e-22 Identity = 46/161 (28.57%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + AP+ S + + +V E+T ++ N M DPR G+Y+ + ++RG + K+ + + ++ K + FV+W P K +C+ PP + + + N+T+I + R+ +F ++ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 264 IHFPLATLAPIVSVDKAGHESNSVAEMTYSCFEPGNQMVKCDPRDGKYMACALLYRGDVVPKDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLYSKRAFVHWYVGEGMEEGEFSEARQDL 424
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.270e-22 Identity = 49/161 (30.43%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF +V +AP+ S + L+V E+T ++ N M DP+ G+Y+ ++RG + K+V+ + ++ S FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY EGM+E EF EA ++ Sbjct: 262 IHFPLVTYAPIISSDRAYHEQLSVAEITSSCFEPNNQMVKCDPQQGKYMACCMLYRGDVVPKDVNVAIAAIKTNRSLQFVDWCPTGFKVGINYQPPIPTPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVSEGMEEGEFAEAREDL 422
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.577e-22 Identity = 52/165 (31.52%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD-----IP-------PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +HF + +APL S +Q+ +V E+T +++ N M D + G+Y+ ++RG + K+ + +++ K + FV+W P K VC+ +P PR L M S N+T+I + R+ +F M+R++AF+HWY GE M+E EF+EA ++ Sbjct: 263 IHFPLASYAPLLSAPRRQHEQNSVEEMTFSCFESGNQMVKCDAKDGKYMACCLLYRGDVVPKDTQAAVASIKTKRTIQFVDWCPTGFKLGVCNEAPATVPGGDLAKVPRSLCMLS----NTTAIAAAWNRLDYKFDLMYRKRAFVHWYVGEAMEEGEFSEAREDL 423
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 7.284e-22 Identity = 48/166 (28.92%), Postives = 88/166 (53.01%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMAS-------------TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +H+ ++ +AP+ S + + ELT Q ++ N M DPR+G+Y+ + ++RG + ++ + ++ K+S VEW P K + P + AS + + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 266 VHYPLISYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 431
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.242e-21 Identity = 50/158 (31.65%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSS--YFVEWIPNNVKSSVCDIPP------RGLSMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 436 LHF + +AP+ S+ ++ +TV +T ++ N+M P G+Y+ M+RG + KE + + N++N+ S FV+W P K + + P G +MA T + N+T+I ++F R++ +F M+ ++AF+HWY GEGM+E E Sbjct: 174 LHFVLCSYAPVISKEKSEHENITVDAITNSVFSENNIMAKCQPHLGKYMACCLMYRGNIVPKEAQKAVQNIRNEKSKTVSFVDWSPTGFKCGINNSKPTTVLGENGDNMARTEKSVCMLSNTTAISQVFSRINHKFDLMYIKRAFVHWYVGEGMEEGE 331
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.768e-21 Identity = 47/161 (29.19%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 2 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV-----CDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 +H+ ++ +AP+ S + + V +LT Q + N M DPR+G+Y+ + ++RG ++ + + +++ K S VEW P K + +P L+ + + + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 267 IHYPLISYAPVISSNRSSHESFKVQDLTLQCAEPNNQMVVCDPRNGKYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 427
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Match: TBA1_ENTHI (Tubulin alpha-1 chain OS=Entamoeba histolytica GN=TUB1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.166e-21 Identity = 53/161 (32.92%), Postives = 94/161 (58.39%), Query Frame = 2 Query: 5 HFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR---GLSMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 460 HF M+ +AP+ + + L+V ELT ++D ++M D G++++ M+RG +S++EV+ + ++ +N+ FV W P + K + P G S AST I N T++ ++F++V++ F MF ++AF+H Y GEGM+E EFT+A ++ Sbjct: 271 HFAMMSYAPIVTPEKAIRQTLSVQELTSSLFDPNSLMIQCDDINKGKFMSCCMMYRGDVSSREVNLAVSGIKKQNTVPFVGWCPCSFKCGINSQPATAVPGSSYASTARSACMIANHTAMCQVFQKVNQNFDLMFGKRAFVHHYVGEGMEENEFTDARQDL 431 The following BLAST results are available for this feature:
BLAST of BQ622912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ622912 ID=BQ622912; Name=BQ622912; organism=Citrus sinensis; type=EST; length=464bpback to top |