BQ622924

Overview
NameBQ622924
Unique NameBQ622924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_CLOK1 (30S ribosomal protein S9 OS=Clostridium kluyveri (strain NBRC 12016) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26
Identity = 67/125 (53.60%), Postives = 80/125 (64.00%), Query Frame = 2 
Query:  107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            FGTGRRK +IARV L  G GK  IN R  +EY     L +  +  PLV       +DV V  HGGG +GQA AI  G++RALLK  ++ R  LKK G LTRD R+ ERKK GL KAR+APQ+SKR
Sbjct:    7 FGTGRRKKSIARVRLVPGEGKITINKRSIEEYFGLETLRV-IVNQPLVLTSTNGKFDVLVNVHGGGFTGQAGAIRHGISRALLKADENLRLELKKAGFLTRDPRMKERKKYGLKKARRAPQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BACAN (30S ribosomal protein S9 OS=Bacillus anthracis GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26
Identity = 65/125 (52.00%), Postives = 85/125 (68.00%), Query Frame = 2 
Query:  107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            +GTGRRK ++ARV L  G G+ IIN RD + Y+    L  + +K PLV      +YDV V  +GGG +GQA AI  G++RALLK   ++R  LK+ GLLTRD+R+ ERKK GL  AR+APQ+SKR
Sbjct:    7 YGTGRRKSSVARVRLVSGEGRVIINGRDFENYIPFAAL-REVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISRALLKADPEYRLTLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BACAC (30S ribosomal protein S9 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26
Identity = 65/125 (52.00%), Postives = 85/125 (68.00%), Query Frame = 2 
Query:  107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            +GTGRRK ++ARV L  G G+ IIN RD + Y+    L  + +K PLV      +YDV V  +GGG +GQA AI  G++RALLK   ++R  LK+ GLLTRD+R+ ERKK GL  AR+APQ+SKR
Sbjct:    7 YGTGRRKSSVARVRLVSGEGRVIINGRDFENYIPFAAL-REVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISRALLKADPEYRLTLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BACAA (30S ribosomal protein S9 OS=Bacillus anthracis (strain A0248) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26
Identity = 65/125 (52.00%), Postives = 85/125 (68.00%), Query Frame = 2 
Query:  107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            +GTGRRK ++ARV L  G G+ IIN RD + Y+    L  + +K PLV      +YDV V  +GGG +GQA AI  G++RALLK   ++R  LK+ GLLTRD+R+ ERKK GL  AR+APQ+SKR
Sbjct:    7 YGTGRRKSSVARVRLVSGEGRVIINGRDFENYIPFAAL-REVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISRALLKADPEYRLTLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_STRCO (30S ribosomal protein S9 OS=Streptomyces coelicolor GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26
Identity = 71/143 (49.65%), Postives = 86/143 (60.14%), Query Frame = 2 
Query:   59 KYVKSRLPGGFAA-QTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDH-RSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            +Y    +   F   Q   G GRRK AIARV +  GTGK+ +N R  ++Y   N +  Q +  P   L  +  YDV  +  GGG+SGQA A+ LGVARAL +   D+ R  LKK G L RD R VERKKAGL KARKAPQYSKR
Sbjct:   29 EYTSESMASAFGEPQPAAGLGRRKNAIARVRIVPGTGKWKVNGRTLEDYFP-NKVHQQEVNEPFKVLELDNRYDVIARISGGGVSGQAGALRLGVARALNEADVDNNRGALKKAGYLKRDDRAVERKKAGLKKARKAPQYSKR 170
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_LACSS (30S ribosomal protein S9 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26
Identity = 69/130 (53.08%), Postives = 82/130 (63.08%), Query Frame = 2 
Query:   92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            A  T  GTGRRK ++ARV L  GTGK  IN +D  +Y+    L L  +K PL       SYD+ V  +GGG SGQA AI  G++RALL V  D R  LK  G+LTRD R+ ERKK GL KARKA Q+SKR
Sbjct:    2 AQVTYNGTGRRKNSVARVRLVPGTGKITINNKDVVDYVPFANLILD-MKQPLTITETTDSYDILVNVNGGGFSGQAGAIRHGISRALLTVDPDFRPALKSAGMLTRDPRMKERKKPGLKKARKASQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_LACCB (30S ribosomal protein S9 OS=Lactobacillus casei (strain BL23) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26
Identity = 67/124 (54.03%), Postives = 80/124 (64.52%), Query Frame = 2 
Query:  110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            GTGRRK ++ARV L  GTGK  +N +D ++YL    L +  +  P        SYDV V  +GGG SGQA A   G+ARALL V  D R PLKK G+LTRD R+ ERKK GL KARKA Q+SKR
Sbjct:    8 GTGRRKNSVARVRLVPGTGKITMNGKDVRDYLPYENL-ITDLSQPFGITETTGSYDVLVNVNGGGFSGQAGATRHGIARALLTVDPDFRGPLKKAGMLTRDPRMKERKKYGLKKARKASQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_LACC3 (30S ribosomal protein S9 OS=Lactobacillus casei (strain ATCC 334) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26
Identity = 67/124 (54.03%), Postives = 80/124 (64.52%), Query Frame = 2 
Query:  110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            GTGRRK ++ARV L  GTGK  +N +D ++YL    L +  +  P        SYDV V  +GGG SGQA A   G+ARALL V  D R PLKK G+LTRD R+ ERKK GL KARKA Q+SKR
Sbjct:    8 GTGRRKNSVARVRLVPGTGKITMNGKDVRDYLPYENL-ITDLSQPFGITETTGSYDVLVNVNGGGFSGQAGATRHGIARALLTVDPDFRGPLKKAGMLTRDPRMKERKKYGLKKARKASQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BACHK (30S ribosomal protein S9 OS=Bacillus thuringiensis subsp. konkukian GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26
Identity = 65/125 (52.00%), Postives = 85/125 (68.00%), Query Frame = 2 
Query:  107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            +GTGRRK ++ARV L  G G+ IIN RD + Y+    L  + +K PLV      +YDV V  +GGG +GQA AI  G++RALLK   ++R  LK+ GLLTRD+R+ ERKK GL  AR+APQ+SKR
Sbjct:    7 YGTGRRKSSVARVRLVPGEGRVIINGRDFENYIPFAAL-REVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISRALLKADPEYRLTLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR 130
[Close]
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BACCZ (30S ribosomal protein S9 OS=Bacillus cereus (strain ZK / E33L) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26
Identity = 65/125 (52.00%), Postives = 85/125 (68.00%), Query Frame = 2 
Query:  107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481
            +GTGRRK ++ARV L  G G+ IIN RD + Y+    L  + +K PLV      +YDV V  +GGG +GQA AI  G++RALLK   ++R  LK+ GLLTRD+R+ ERKK GL  AR+APQ+SKR
Sbjct:    7 YGTGRRKSSVARVRLVPGEGRVIINGRDFENYIPFAAL-REVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISRALLKADPEYRLTLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR 130
The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RS9_CLOK12.929e-2653.6030S ribosomal protein S9 OS=Clostridium kluyveri (... [more]
RS9_BACAN2.929e-2652.0030S ribosomal protein S9 OS=Bacillus anthracis GN=... [more]
RS9_BACAC2.929e-2652.0030S ribosomal protein S9 OS=Bacillus anthracis (st... [more]
RS9_BACAA2.929e-2652.0030S ribosomal protein S9 OS=Bacillus anthracis (st... [more]
RS9_STRCO3.825e-2649.6530S ribosomal protein S9 OS=Streptomyces coelicolo... [more]
RS9_LACSS3.825e-2653.0830S ribosomal protein S9 OS=Lactobacillus sakei su... [more]
RS9_LACCB3.825e-2654.0330S ribosomal protein S9 OS=Lactobacillus casei (s... [more]
RS9_LACC33.825e-2654.0330S ribosomal protein S9 OS=Lactobacillus casei (s... [more]
RS9_BACHK3.825e-2652.0030S ribosomal protein S9 OS=Bacillus thuringiensis... [more]
RS9_BACCZ3.825e-2652.0030S ribosomal protein S9 OS=Bacillus cereus (strai... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00015 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00015 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bp
ACTGGTAGTATCGGCCACAGAAGCTGCGCCAGCTGAACTGGAAACAACTG
ACCTCAAGAAATACGTCAAGTCGAGGCTTCCCGGTGGCTTTGCGGCTCAA
ACTATTTTTGGAACGGGCCGTCGGAAATGCGCCATTGCTCGTGTCGTCCT
CCAAGAAGGCACCGGCAAATTCATCATCAACTACCGCGATGCCAAGGAAT
ATCTTCAAGGCAATCCACTATGGCTACAGTATATAAAAGTCCCTTTGGTA
ACTTTGGGTTATGAAACTAGCTATGATGTTTTTGTGAAAGCTCATGGTGG
CGGCCTCTCTGGTCAAGCTCAAGCAATAACACTCGGCGTTGCTCGTGCAT
TGTTGAAGGTGAGCCAGGACCATAGATCCCCTCTGAAAAAGGAAGGCCTT
CTGACTAGAGATTCCAGAGTAGTAGAGAGGAAAAAAGCTGGACTCCATAA
AGCCCGCAAAGCCCCACAGTATTCCAAACGTTGAGGCCAGAATTACAGTG
TGATGGACTGTTACCCGTAGATCTATTTTCTGCTTGTATCTCTGAATTAT
TATTATTATTATTATTTTTGGTTTAACATTTTATGTTTGGAGTTTTGTAC
TTCAGTTCCGGGTATCATGGAATCATAAACCATTTTTGATAAAAAAAACC
TAACAAAACAACTACAAAAA
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