BQ622924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_HAES2 (30S ribosomal protein S9 OS=Haemophilus somnus (strain 2336) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK + ARV ++ G+GK +IN R+ Y G ++ PL + D++V GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GLHKAR+ PQYSKR Sbjct: 7 YGTGRRKSSSARVFIKPGSGKIVINQRELDVYF-GRETSRMIVRQPLELVELTDKLDLYVTVKGGGISGQAGAIRHGITRALIEYDETLRPALRAAGFVTRDARRVERKKIGLHKARRRPQYSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_HAES1 (30S ribosomal protein S9 OS=Haemophilus somnus (strain 129Pt) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK + ARV ++ G+GK +IN R+ Y G ++ PL + D++V GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GLHKAR+ PQYSKR Sbjct: 7 YGTGRRKSSSARVFIKPGSGKIVINQRELDVYF-GRETSRMIVRQPLELVELTDKLDLYVTVKGGGISGQAGAIRHGITRALIEYDETLRPALRAAGFVTRDARRVERKKIGLHKARRRPQYSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BORT9 (30S ribosomal protein S9 OS=Borrelia turicatae (strain 91E135) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 62/128 (48.44%), Postives = 82/128 (64.06%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKV----PLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK ++ARV ++EG G IN RD Y+Q L+ +K PLV YD+++ +GGG+SGQA AI G+ARAL + ++++ LK G LTRDSR VERKK G KARK+ Q+SKR Sbjct: 14 GTGRRKSSVARVYIREGKGDIKINNRDFDSYIQ-----LENLKTIALSPLVLTNTLGKYDLYINIYGGGISGQAGAIRHGIARALFDLDEEYKMVLKSNGFLTRDSRKVERKKFGKKKARKSFQFSKR 136
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_ACTSZ (30S ribosomal protein S9 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 59/130 (45.38%), Postives = 79/130 (60.77%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 AA +GTGRRK + ARV ++ G GK IN R + Y G ++ PL + D+++ GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GLHKAR+ PQYSKR Sbjct: 3 AANQNYGTGRRKSSSARVFIKPGNGKITINQRSLEVYF-GRETSRMIVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRPALRAAGFVTRDARRVERKKVGLHKARRRPQYSKR 131
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RR9_STIHE (30S ribosomal protein S9, chloroplastic OS=Stigeoclonium helveticum GN=rps9 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 66/132 (50.00%), Postives = 80/132 (60.61%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETS--------YDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 G GRRK A+A+V L G+G+FIIN A YLQ +P + I P L + S D VK GGG GQA AI LGVARAL + + ++R LK G LT+DSR+ ER+K GL KARKAPQY KR Sbjct: 11 GIGRRKEAVAQVQLLAGSGQFIINGLPANLYLQEDPRSILAIDAPFKQLHVDHSADKDSLQTLDTIVKVQGGGKIGQANAIKLGVARALCEFNGEYRKSLKDSGFLTQDSRIKERRKYGLKKARKAPQYHKR 142
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_SALTO (30S ribosomal protein S9 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24 Identity = 64/122 (52.46%), Postives = 73/122 (59.84%), Query Frame = 2 Query: 116 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GRRK AI RV + GTGK N RD + Y + Q IK PLVT +DV GGG +GQA A+ L +ARAL+ D R LKK G LTRD+R E KK GL KARKAPQYSKR Sbjct: 34 GRRKEAIVRVRIVPGTGKITCNGRDLEAYFPSK-VHQQLIKDPLVTTEKAEEFDVIANLRGGGTTGQAGALRLAIARALIASEPDDRPALKKAGFLTRDARAKESKKYGLKKARKAPQYSKR 154
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_PSEPF (30S ribosomal protein S9 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24 Identity = 61/125 (48.80%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A ARV L+ GTG IN R + G ++ PL +D++V GGG+SGQA AI G+ RAL+ + RS L+K G +TRD+R VERKK GL KARK PQYSKR Sbjct: 7 YGTGRRKTATARVFLRPGTGNISINNRSLDTFF-GRETARMVVRQPLELTETVEKFDIYVTVIGGGVSGQAGAIRHGITRALMDYDETLRSALRKAGFVTRDAREVERKKVGLRKARKRPQYSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_CLAMS (30S ribosomal protein S9 OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24 Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 2 Query: 116 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDH-RSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GRRK A ARV L G+G +N R+ +Y N L Q + P L SYDV + GGG SGQA A+ LG+ARAL ++ +++ R+ LKK G L+RD+RV ERKKAGL KARKAPQ+SKR Sbjct: 40 GRRKQATARVRLVPGSGSITVNGREFADYFP-NKLHQQLVNDPFKVLDLLGSYDVVARISGGGPSGQAGALRLGIARALNEIDEENNRAVLKKNGFLSRDARVKERKKAGLKKARKAPQFSKR 161
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_SERP5 (30S ribosomal protein S9 OS=Serratia proteamaculans (strain 568) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.042e-23 Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 A +GTGRRK + ARV ++ G+G +IN R ++Y G ++ PL +D+++ GGG+SGQA AI G+ RAL++ + R L+K G +TRD+R VERKK GL KAR+ PQ+SKR Sbjct: 2 AENQYYGTGRRKSSAARVFIKPGSGNIVINQRSLEQYF-GRETARMVVRQPLELTDMVGKFDLYITVKGGGISGQAGAIRHGITRALMEYDETLRGELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_PSEU2 (30S ribosomal protein S9 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpsI PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.042e-23 Identity = 60/125 (48.00%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A ARV L+ GTG IN R + G ++ PL +D++V GGG+SGQA AI G+ RAL++ + R L+K G +TRD+R VERKK GL KARK PQYSKR Sbjct: 7 YGTGRRKTATARVFLRPGTGNISINNRSLDNFF-GRETARMVVRQPLELTETVEKFDIYVTVIGGGVSGQAGAIRHGITRALMQYDETLRGALRKAGFVTRDAREVERKKVGLRKARKRPQYSKR 130 The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bpback to top |