BQ622924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_RHOPS (30S ribosomal protein S9 OS=Rhodopseudomonas palustris (strain BisB5) GN=rpsI PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV ++ G GK +N R+ + Y P+ I+ PLV YDV GGGLSGQA A+ G+++AL + R LKK G LTRDSRVVERKK G KAR++ Q+SKR Sbjct: 35 YATGKRKDAVARVWIKPGAGKVTVNAREVEVYF-ARPVLRMMIQQPLVAAARAGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_MANSM (30S ribosomal protein S9 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rpsI PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 AA +GTGRRK + ARV ++ G+GK IN R+ Y G ++ PL + D+++ GGG+SGQA AI G+ RAL++ + R L+ G +TRD+R VERKK GL KAR+ PQ+SKR Sbjct: 3 AANQNYGTGRRKSSSARVFIKPGSGKITINQRELDVYF-GRETSRMIVRQPLELVEMTEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRPVLRAAGFVTRDARRVERKKVGLRKARRRPQFSKR 131
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_BARHE (30S ribosomal protein S9 OS=Bartonella henselae GN=rpsI PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22 Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV ++ G+GK IN ++ +Y P+ ++ P+V +T +D+ GGGLSGQA A+ G+++AL + R+ LKK G LTRDSRVVERKK G KAR++ Q+SKR Sbjct: 38 YATGKRKDAVARVWIKPGSGKITINNKEFDKYF-ARPVLRMILRQPIVATNRDTQFDIIATVAGGGLSGQAGAVRHGISKALTYYEPELRTILKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 161
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_TREPS (30S ribosomal protein S9 OS=Treponema pallidum subsp. pallidum (strain SS14) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK A+ARV ++ G G +N RD Y L+ ++ PL E YDV V +GGGL GQA A G+ARAL++ +++ L+ GLLTRDSR+VERKK G AR+ Q+SKR Sbjct: 7 GTGRRKTAVARVCIRMGNGNVTVNRRDVGAYFP-TAEQLRRVREPLFATANERRYDVIVNVYGGGLDGQAGACAHGIARALVRADASNQASLRAGGLLTRDSRMVERKKYGQRGARRRFQFSKR 129
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_TREPA (30S ribosomal protein S9 OS=Treponema pallidum GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 110 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 GTGRRK A+ARV ++ G G +N RD Y L+ ++ PL E YDV V +GGGL GQA A G+ARAL++ +++ L+ GLLTRDSR+VERKK G AR+ Q+SKR Sbjct: 7 GTGRRKTAVARVCIRMGNGNVTVNRRDVGAYFP-TAEQLRRVREPLFATANERRYDVIVNVYGGGLDGQAGACAHGIARALVRADASNQASLRAGGLLTRDSRMVERKKYGQRGARRRFQFSKR 129
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_SHELP (30S ribosomal protein S9 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 55/130 (42.31%), Postives = 79/130 (60.77%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +A +GTGRRK + ARV + G+G ++N R EY G ++ PL + D++V GGG++GQA AI G+ RAL+++ + R L+ G +TRD+R VERKK GL KAR+ PQ+SKR Sbjct: 2 SATQYYGTGRRKTSTARVFAKVGSGNIVVNQRPLDEYF-GRETARMVVRQPLELVEMTEKLDIYVTVKGGGITGQAGAIRHGITRALMELDEALRPSLRAAGFVTRDARKVERKKVGLRKARRKPQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_RICCK (30S ribosomal protein S9 OS=Rickettsia canadensis (strain McKiel) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 2 Query: 92 AAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +A + TG+RK AIARV L+ G GK ++N + +Y +++ I P V YDV GGG+SGQ AI G+++AL K + D + L+K GLLTRDSRVVERKK G KARK Q+SKR Sbjct: 33 SASKFYATGKRKNAIARVWLKVGKGKIVVNKKTIDQYFSSET-YVKTILQPFVLTKTIDQYDVICTVRGGGISGQKGAILHGISKALDKSAPDFHAMLRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 161
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_RALEH (30S ribosomal protein S9 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 55/125 (44.00%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 +GTGRRK A+ARV ++ G G I+N + KEY L ++ PL + ++D+ V GGG +GQA A+ G+ RAL+ +S L K G +TRD+R VERKK G HKAR+ Q+SKR Sbjct: 7 YGTGRRKSAVARVFIKSGKGDIIVNGKPIKEYF-ARETSLMIVRQPLELTAHAETFDIKVNVTGGGETGQAGAVRHGITRALIDYDATLKSALSKAGYVTRDAREVERKKVGFHKARRRKQFSKR 130
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_METNO (30S ribosomal protein S9 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 59/125 (47.20%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 107 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 + TG+RK A+ARV ++ G G +N R Y P+ ++ PL YD+ V GGGLSGQA A+ G+ARAL + RSPLK+EG LTRD RVVERKK G KAR++ Q+SKR Sbjct: 39 YATGKRKDAVARVWIKPGAGTITVNDRPVDTYF-ARPVLRMILQQPLHVANRVDQYDIVVTVTGGGLSGQAGAVRHGLARALTYYEPELRSPLKREGFLTRDPRVVERKKYGRKKARRSFQFSKR 162
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Match: RS9_METI4 (30S ribosomal protein S9 OS=Methylacidiphilum infernorum (isolate V4) GN=rpsI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 63/128 (49.22%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 104 IFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKV--PLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 481 I TGRRK A A V+L+ G G+ IN +D + Y P ++ +V PL + +D+ KA GGGL GQAQA+ L V+RAL+K +RS LKKEGLLTRD R+ ERKK G ARK Q+SKR Sbjct: 12 IQATGRRKTATATVILKPGKGEVSINGKDLEFYF---PTFVHRYEVFKPLEVIEGTKKFDIIAKARGGGLMGQAQALKLAVSRALIKYDPSYRSLLKKEGLLTRDPRMKERKKTGQPGARKRFQFSKR 136 The following BLAST results are available for this feature:
BLAST of BQ622924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622924 ID=BQ622924; Name=BQ622924; organism=Citrus sinensis; type=EST; length=670bpback to top |