BQ622945

Overview
NameBQ622945
Unique NameBQ622945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:174..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_STAAU (Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.814e-24
Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERV 569
            D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     ++P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER+
Sbjct:  279 DLTKVWYHDEYPLIEVGEFELNRNPDNYFTDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHHYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERI 445          

HSP 2 Score: 25.7942 bits (55), Expect = 1.814e-24
Identity = 9/29 (31.03%), Postives = 16/29 (55.17%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G+YP+W +YIQ +  +       +P
Sbjct:  249 AIEKGDYPKWTMYIQVMTEEQAKNHKDNP 277          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.007e-24
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF--MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENN-FKQPGERYRSWAPDRQERV 569
            D+TK WP    PL  VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNA +CPH+  H DG M     +  + V Y P+ ++  +    +  P   + G  +      +++ + QP   +  +  ++++R+
Sbjct:  278 DLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRL 439          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.129e-24
Identity = 71/180 (39.44%), Postives = 99/180 (55.00%), Query Frame = 3
Query:   15 ETILSGN-STFRLLIPITR----TNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDG-FMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQP 524
            ++I +GN   +RL+I +       N      D+TK W     PL  VG++VLNKN  N+FAE E +AF P  VVPGI +S DKMLQ R+FAY DTQ HRLGPNY+ LP+N   CP+R    N   DG F    ++     Y P+ ++           +  ++G  ++   + E+NF QP
Sbjct:  266 DSIENGNYPVWRLMIQVMTFEEAANYRFNPFDITKVWSHKEFPLILVGKIVLNKNPTNYFAEVEQIAFAPSHVVPGIEFSPDKMLQGRLFAYPDTQFHRLGPNYVQLPIN---CPYRSRAHNTQRDGCFALDYNQGGMPTYHPNSFNGAIERTDVKESAWSVSGDVDRFNGDDEDNFSQP 442          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.198e-24
Identity = 60/116 (51.72%), Postives = 74/116 (63.79%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 422
            D+TK W     PL PVGR VLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+F+Y DT RHRLG NYL LPVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  298 DLTKVWSHKEFPLIPVGRFVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVN---CPYRTRVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          

HSP 2 Score: 28.8758 bits (63), Expect = 5.198e-24
Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +IA GN+P W  YIQ +  +  + + ++P
Sbjct:  268 AIANGNFPSWTFYIQVMTFEQAENWKWNP 296          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.781e-24
Identity = 63/172 (36.63%), Postives = 95/172 (55.23%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVL 572
            D+TK W  D  PL  VG   LN+N DN+F + E +AF    ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  +   +ER+L
Sbjct:  279 DLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQVAFASTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEGAKERIL 446          

HSP 2 Score: 25.7942 bits (55), Expect = 6.781e-24
Identity = 9/29 (31.03%), Postives = 16/29 (55.17%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G+YP+W +YIQ +  +       +P
Sbjct:  249 AIEKGDYPKWTMYIQVMTEEQAKNHKDNP 277          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.492e-23
Identity = 63/178 (35.39%), Postives = 93/178 (52.25%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSW-APDRQERVLN 575
            ++L P   + L    LD TK W +  +P + VG + LNK  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LP+N P     +++ +G  N      +++Y PSR    +   ++      + G  ++  I    NF Q G  YRS    D+Q+ + N
Sbjct:  279 QVLTPEQLSKLDYNGLDATKVWLD--VPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQTQLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITN 454          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.529e-23
Identity = 60/179 (33.52%), Postives = 94/179 (52.51%), Query Frame = 3
Query:   90 LDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQ--RHRLGPNYLMLPVNAPKCPHRNNHYDG-FMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGR--------------REKACIEKENNFKQPGERYRSWAPDRQERVLN 575
            LD TK+ PE+  PLQ +G + LN+N  N+FAE E ++F PG +V G+ ++ D +LQ R+++Y DTQ  RHR GPN+  LP+N P     NNH DG    ++H++         Y P+   + YP  ++   GR                +     ++++ QP   + S  P  Q+ V+N
Sbjct:  328 LDPTKFLPEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGHIVRGVDFTEDPLLQGRLYSYLDTQLNRHR-GPNFEQLPINRPVSGVHNNHRDGQGQAWIHKNIH------HYSPSYLNKGYPAQANQTVGRGFFTTPGRTASGVLNRELSATFDDHYTQPRLFFNSLTPVEQQFVIN 499          

HSP 2 Score: 31.187 bits (69), Expect = 5.529e-23
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            +I +GN P W+L +Q ID D    + FD
Sbjct:  299 AIESGNAPSWELAVQLIDEDKAQAYGFD 326          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.406e-23
Identity = 66/174 (37.93%), Postives = 90/174 (51.72%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTR--------HAERYPIPSDVITGRREKACIEKENNFKQPGERYRS 542
            ++L P   + L    LD TK W +  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN+PK P  N++ DG  N       VD     Y+P+R         A     P   ++G  ++  I    +F Q G  YRS
Sbjct:  279 KVLSPKALSKLDYNGLDATKVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRS 447          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 7.406e-23
Identity = 66/174 (37.93%), Postives = 90/174 (51.72%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTR--------HAERYPIPSDVITGRREKACIEKENNFKQPGERYRS 542
            ++L P   + L    LD TK W +  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN+PK P  N++ DG  N       VD     Y+P+R         A     P   ++G  ++  I    +F Q G  YRS
Sbjct:  279 KVLSPKALSKLDYNGLDATKVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRS 447          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_ASPOR (Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.584e-22
Identity = 59/176 (33.52%), Postives = 91/176 (51.70%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPT-------RHAER------YPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQERVLN 575
            D TK  PE+ +P+  +G++ LN+N  N+FAE E + F PG +V G+ ++ D +LQ R+F+Y DTQ +R  GPN+  LP+N P+ P  NN+ DG          +   P+ Y P        + A +      +  P    TGR  +A     E+ + QP   Y S  P  Q+ V++
Sbjct:  328 DPTKIVPEEYVPITKLGKMTLNRNPRNYFAETEQVMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGGPNFEQLPINQPRVPVHNNNRDGAGQMF-----IPLNPNAYSPNTLNKGSPKQANQTVGKGFFTAPGRESTGRFTRAVSPSFEDVWSQPRLFYNSLTPAEQQFVVD 498          

HSP 2 Score: 33.8834 bits (76), Expect = 1.584e-22
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            +I AG YPEW+L +Q +D + + +F FD
Sbjct:  298 AIEAGRYPEWELGVQIMDEEDQLKFGFD 325          
The following BLAST results are available for this feature:
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_STAAU1.814e-2436.84Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=... [more]
CATA_PSEAE3.007e-2437.65Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATA_ASCSU5.129e-2439.44Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_DANRE5.198e-2451.72Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATB_STAAA6.781e-2436.63Catalase-like protein OS=Staphylococcus aureus sub... [more]
CATA_VIBCH1.492e-2335.39Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CAT3_NEUCR5.529e-2333.52Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_VIBVY7.406e-2337.93Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA_VIBVU7.406e-2337.93Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATB_ASPOR1.584e-2233.52Catalase B OS=Aspergillus oryzae GN=catB PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00036 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00036 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622945 ID=BQ622945; Name=BQ622945; organism=Citrus sinensis; type=EST; length=614bp
CTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCAGACTA
TTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACCTGGACGTAAC
CAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGGTCCTTAATCGATGGATTAAGGGTTTATGTGACC
CACGTGTCACCCAT
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