BQ622945

Overview
NameBQ622945
Unique NameBQ622945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:174..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.310e-21
Identity = 56/122 (45.90%), Postives = 70/122 (57.38%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRY-----DPTRHAE 443
            DVTK W +   PL  VG L LN+N  N+FAE E  AF P  +VPG+  S D+MLQ R+FAY D  R+R+G N+  LPVNAP+CP  +   DG M         +Y P+ Y        RHAE
Sbjct:  276 DVTKTWSQKDYPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRCPVNSYQRDGSMATGSYGSAPNYEPNSYAAAPKQSPRHAE 397          

HSP 2 Score: 21.9422 bits (45), Expect = 1.310e-21
Identity = 9/29 (31.03%), Postives = 14/29 (48.28%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFDP 88
            +I  G+YP W + IQ +        D +P
Sbjct:  246 AIERGDYPRWTVCIQVMSEAEAASRDENP 274          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_STAXY (Catalase B OS=Staphylococcus xylosus GN=katB PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 62/170 (36.47%), Postives = 90/170 (52.94%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQERV 569
            D+TK W +   PL  VG   LN+N DN+F + E  AF P  +VPGI +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+          +  P   + G   +     + +N F+QPG  +R  + ++QER+
Sbjct:  278 DLTKVWYKGDYPLIEVGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENICPFSR---DGQMRILDNNQGGGTHYYPNSDGSFEDQPEFKKPGLKVEGEAYEYDFRQDDDNYFEQPGRLFRLQSKEQQERI 444          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 3
Query:   45 RLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMH-RDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSW-APDRQERVLN 575
            ++L P   + L    LD TK W    +P + VG + LN+  +NFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN P     N++ +G  N     + +V+Y PSR        ++      + G  ++  I K  +F Q G  YRS    DR + + N
Sbjct:  279 KVLSPEALSKLDYNGLDATKVWLN--VPDRKVGTMTLNRLPENFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLTSVNNHNQNGLSNNAQLSNGDVNYEPSRKLNLAEDNQFKAVETKLVGTVQQKAISKPRDFYQAGVLYRSMNEQDRSDLIAN 455          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_STAS1 (Catalase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=katA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 61/170 (35.88%), Postives = 90/170 (52.94%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQERV 569
            D+TK W +   PL  VG   LN+N DN+F + E  AF P  +VPGI +S D+MLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+          +  P   + G   +     + +N F+QPG  +R  + ++QER+
Sbjct:  278 DLTKVWYKGDYPLIEVGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDRMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRILDNNQGGSTHYYPNSEGAFEDQPEFKKPGLKVEGEAYEYDFREDDDNYFEQPGRLFRLQSKEQQERI 444          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 377
            D+TK WP    P   +G L LN+N +N+FAE E  AF+P  +VPGI +S DK+LQ RIF+Y D  R+RLG +Y  +PVN P+CP  + H DG MN
Sbjct:  277 DLTKVWPHADYPPVEIGVLELNRNPENYFAEIENAAFSPSNIVPGIGFSPDKVLQARIFSYADAHRYRLGTHYEHIPVNQPRCPVHHYHRDGQMN 371          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 61/165 (36.97%), Postives = 86/165 (52.12%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNH-YDGFMNFMHRDEEVDYFPSRYDPTRHAER---YPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERVLN 575
            D+TK WP +  P   +G L LN+N +N FAE E   F+P   VPGI  S DKMLQ R+FAYGD  R+R+G N   LPVN P       H  DGF+         +Y P+ +      +R    P P   +TG        ++++F Q G+ YR  + D + R+++
Sbjct:  277 DLTKVWPHEDYPPVEIGTLELNRNPENIFAEVEQSIFSPAHFVPGIGPSPDKMLQGRLFAYGDAHRYRVGINADHLPVNRPHATEARTHSRDGFLYDGRHKGAKNYEPNSFGGPVQTDRPLWQPTPVTGVTGDHAAPSHAEDDDFTQAGDLYRLMSEDEKGRLID 441          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_EMENI (Catalase B OS=Emericella nidulans GN=catB PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.861e-21
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKML-QCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 368
            D TK  PE+ +PL P+G++ LN+N  N+FAE E + F PG VV G+ ++ D +L Q R+F+Y DTQ +R  GPN+  LP+N P+    NN+ DG
Sbjct:  327 DPTKIVPEEYVPLTPLGKMTLNRNPRNYFAETEQVMFQPGHVVRGVDFTEDPLLQQGRLFSYLDTQLNRNGGPNFEQLPINQPRVAIHNNNRDG 420          

HSP 2 Score: 35.4242 bits (80), Expect = 2.861e-21
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    2 SIAAGNYPEWKLYIQTIDPDHEDQFDFD 85
            SI AG YPEW+L +Q +D + + +F FD
Sbjct:  297 SIEAGRYPEWELNVQIMDEEDQLRFGFD 324          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.111e-21
Identity = 49/95 (51.58%), Postives = 62/95 (65.26%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 377
            D+TK WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D  RHRLG +Y  +PVN PKC   + H DG MN
Sbjct:  277 DLTKVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCLVHHYHRDGQMN 371          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.931e-21
Identity = 48/110 (43.64%), Postives = 73/110 (66.36%), Query Frame = 3
Query:   42 FRLLIPITRTNLTLTHLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDG 368
            F+L+    ++      LD TK  PE+++P  P+G++VLN+N  N+FAE E + F PG VV GI +++D +LQ R+++Y DTQ +R  GPN+  LP+N P+ P  NN+ DG
Sbjct:  317 FQLVNEADQSKFDFDLLDPTKIIPEELVPFTPIGKMVLNRNPKNYFAETEQIMFQPGHVVRGIDFTDDPLLQGRLYSYLDTQLNRHGGPNFEQLPINRPRIPFHNNNRDG 426          
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 3
Query:   93 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG 368
            D+TK W +   PL  VG   LN+N +NFFA+ E  AF P  +VPGI  S D+MLQ R+F Y D QR+RLG NY  +PVN P+CP  +N  DG
Sbjct:  286 DLTKVWSKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDRMLQARLFNYADAQRYRLGVNYRQIPVNRPRCPVHSNQRDG 377          
The following BLAST results are available for this feature:
BLAST of BQ622945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_PSEPU1.310e-2145.90Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATB_STAXY1.397e-2136.47Catalase B OS=Staphylococcus xylosus GN=katB PE=3 ... [more]
CATA_VIBPA1.397e-2135.75Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_STAS11.397e-2135.88Catalase OS=Staphylococcus saprophyticus subsp. sa... [more]
CATA_RHIME1.397e-2151.58Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
BCA_STRVL1.397e-2136.97Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATB_EMENI2.861e-2146.81Catalase B OS=Emericella nidulans GN=catB PE=2 SV=... [more]
CATA_BRUSU3.111e-2151.58Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATB_AJECA6.931e-2143.64Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATA_HAEIN1.544e-2052.17Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00036 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00036 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622945 ID=BQ622945; Name=BQ622945; organism=Citrus sinensis; type=EST; length=614bp
CTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTACATTCAGACTA
TTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACCTGGACGTAAC
CAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGGTCCTTAATCGATGGATTAAGGGTTTATGTGACC
CACGTGTCACCCAT
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