BQ622946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.483e-13 Identity = 50/143 (34.97%), Postives = 66/143 (46.15%), Query Frame = 3 Query: 27 WYDAGKAEYFASSS-----------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGG-IFNPLNFAPTDEAKEK----ELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 407 W DAGK E SS TL IE ++ Y+E +R ++ + + YPGG F+PL A K + E+ + RLAM+ FLGF VQ TGKGP N H+SDP H TI+ T S + Sbjct: 162 WQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRL-----------------YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.483e-13 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 404 +PGG F+PL A E K KE+ NGRLAM A LGF +Q VTG+GP ENL +H+SDP+ N ++ ++G Sbjct: 201 HPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAG 272
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.352e-13 Identity = 38/64 (59.38%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H+SDP +N Sbjct: 192 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNN 255
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 38/64 (59.38%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL HI+DP +N Sbjct: 186 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 249
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 189 YPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL HI+DP +N Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL HI+DP +N Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 180 YPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 243
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 193 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 256
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12 Identity = 38/64 (59.38%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 201 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 380 YPGG F+PL A EA K KEL GRLAML+ GF VQ VTGKGP ENL HI+DP +N Sbjct: 189 YPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNN 252 The following BLAST results are available for this feature:
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622946 ID=BQ622946; Name=BQ622946; organism=Citrus sinensis; type=EST; length=548bpback to top |