BQ622954

Overview
NameBQ622954
Unique NameBQ622954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.818e-18
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            TF PERF+ +  DFKG NFEL+PFG+GRR+CPG+ + + ++HL L +L+  FDWKL N      + +E+ +GL   K  PL A+PV
Sbjct:  406 TFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIPV 491          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.050e-18
Identity = 41/84 (48.81%), Postives = 61/84 (72.62%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVP 245
            F PERFL S+ ++ G+ F+ IPFG+GRRICPG PLA+R++ L+L SL+++F W+L     N  +DME+ F L++  A+PL  +P
Sbjct:  400 FQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.050e-18
Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 3
Query:    6 FIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD--MEDKFGLTVQKAEPLHAV 242
            FIPERFL    +  + +G +FELIPFGAGRRIC G  + I M+  +LG+LI+SFDWKL N  +D  ME+ FGL +QKA PL A+
Sbjct:  414 FIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVVDINMEETFGLALQKAVPLEAI 497          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.289e-18
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            +F PERFLGS  D KGQ++ LIPFGAGRR+C GLPL  RM+H  LGSL+  F+W+L +     +++M+   G+T +K + L  +P
Sbjct:  418 SFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.289e-18
Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            FIPERF+ S  D+KG +FEL+PFG+GRR+CPG+ L + ++HL L +L+  FDWKL       ++D+E+ +GL   K  PL  +PV
Sbjct:  407 FIPERFMHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGLVCPKKVPLQLIPV 491          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.178e-17
Identity = 39/85 (45.88%), Postives = 59/85 (69.41%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVPV 248
            FIPERF+ +  D+KG NFE +PFG+GRR+CPG+ + + ++HL L +L+  FDWKL    +  ++D+E+ +GL   K  PL  +PV
Sbjct:  407 FIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLIPV 491          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.477e-17
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 3
Query:    6 FIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAEPLHAV 242
            F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  411 FYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.637e-17
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 3
Query:    6 FIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAEPLHAV 242
            F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  411 FNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 7.637e-17
Identity = 40/85 (47.06%), Postives = 59/85 (69.41%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            F PERF  S+ DF+GQ+F+L+PFG+GRRICPG+P+AI  + L L +L+  FDW + +     ++DME+   +++ K  PL  VPV
Sbjct:  415 FNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQLVPV 499          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVPV 248
            +F PERFL S+ DF+G +FE IPFGAGRRICPG+  AI  + L L  L+  FDWKL     N  +DM +  G+T+++   L  +P+
Sbjct:  421 SFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPI 506          
The following BLAST results are available for this feature:
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
C71B1_THLAR1.818e-1848.84Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C80A1_BERST4.050e-1848.81Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C75A2_SOLME4.050e-1855.95Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C76A2_SOLME5.289e-1849.41Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71BE_ARATH5.289e-1848.24Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH1.178e-1745.88Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY4.477e-1753.57Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A1_PETHY7.637e-1753.57Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71B2_ARATH7.637e-1747.06Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71DA_SOYBN9.975e-1747.67Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00045 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622954 ID=BQ622954; Name=BQ622954; organism=Citrus sinensis; type=EST; length=532bp
ACACTTTTATTCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGC
CAGAATTTTGAGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGG
TTTACCATTGGCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTA
ACTCTTTTGATTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAA
TTTGGCCTCACCGTACAAAAGGCTGAACCCCTTCATGCTGTCCCTGTTGC
CATCTAGTTCTATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGG
TAGCCACTATATAAAGCGCTTGGTGGTTAGTTATATGTGTGTAATCATTC
TTAAGTGCGGGCGCTTTCATTTTTTTTTTATGTAGACACGTAACTTAACA
GAGTTAATCTTTAATAAACTATAAAGTCATGCGATTTAATAGCATTGAAA
GCTGACTCTATTAAATTGCACGGCTTAAAAGTTTGTTCACATGAAAAAAA
ATGAGAGTTCCCCCACTATATTATCTCTTATA
back to top