BQ622954

Overview
NameBQ622954
Unique NameBQ622954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPL 233
            FIPERFL S  D+KGQ+FEL+PFGAGRRICPG+   I M+ L L +L+  FDW L N     ++DME+  G  + K  PL
Sbjct:  412 FIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPL 491          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVPVAI 254
            F PERF+ S+ D++GQ++EL+PFG+GRRICPG+P+ I  + L L +L+  FDWKL     + ++D E+   LT+ K  PL  VPV +
Sbjct:  415 FDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLQLVPVRV 501          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.303e-16
Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            F+PERF  SN D KGQNFEL+ FG+GRRICPGL +   M+   L +++  FDWKL       ++DME+  GLTV K   L  VPV
Sbjct:  411 FLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVEDIDMEEAPGLTVSKKSELVLVPV 495          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.701e-16
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVP 245
            F PERF+ S+ D+KG NFE +PFGAGRRICPG+   +  + L+L  L+  FDW L     N ++D+ ++FG+TV K E L  +P
Sbjct:  398 FCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDLCLIP 481          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.902e-16
Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAEPLHAVP 245
            F PER L S +DF+GQ+FELIPFGAGRR+CPG+  A+ +  ++L +L++ FDW+  +   D+ +  G  +++  PL+ +P
Sbjct:  400 FRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDETDVAESIGSVIRRMHPLYVIP 479          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.790e-16
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 3
Query:    6 FIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHN--MDMEDKFGLTVQKAEPLHAVPV 248
            F PERF     S  D +GQ++  IPFG+GRR CPG  LA++++H+ L  +I  F WK DN N  +DME+K G+T+ +A P+  VPV
Sbjct:  408 FRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVPV 493          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.790e-16
Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 3
Query:    6 FIPERFL-GSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAEPLHAVPV 248
            F PERFL G NA  D +G +FELIPFGAGRRIC G  + I ++  +LG+L++SFDWKL      ++M++ FGL +QKA PL A+ +
Sbjct:  421 FDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAMVI 506          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.790e-16
Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVPVAI 254
            F PERF+ S  D++GQ++EL+PFG+GRRICPG+P+ I  + L L +L+  FDWKL     + ++D E+   LT+ K  PL  VPV +
Sbjct:  415 FDPERFMDSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLKLVPVRV 501          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.950e-16
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAEPLHAVPV 248
            F P+RFL S  DFKG +FE +PFG GRRICPG+  A+  + L L  L+  FDW+ +   ++M++  G+TV++ + L+  PV
Sbjct:  407 FNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQSNTEKLNMKESRGVTVRREDDLYLTPV 487          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            FIPERF  S+ DFKG +FE IPFGAGRR+CPG+   +  + L L  L+  F+W+L N     ++DM++ FG+TV +   L  +P
Sbjct:  415 FIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLIP 498          
The following BLAST results are available for this feature:
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
C71BZ_ARATH9.975e-1753.75Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH9.975e-1747.13Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BQ_ARATH1.303e-1651.76Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA1.701e-1647.62Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AN_ARATH2.902e-1643.75Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN3.790e-1647.67Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C75A4_GENTR3.790e-1652.33Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71BJ_ARATH3.790e-1647.13Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO4.950e-1644.44Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71D8_SOYBN6.465e-1646.43Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00045 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622954 ID=BQ622954; Name=BQ622954; organism=Citrus sinensis; type=EST; length=532bp
ACACTTTTATTCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGC
CAGAATTTTGAGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGG
TTTACCATTGGCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTA
ACTCTTTTGATTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAA
TTTGGCCTCACCGTACAAAAGGCTGAACCCCTTCATGCTGTCCCTGTTGC
CATCTAGTTCTATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGG
TAGCCACTATATAAAGCGCTTGGTGGTTAGTTATATGTGTGTAATCATTC
TTAAGTGCGGGCGCTTTCATTTTTTTTTTATGTAGACACGTAACTTAACA
GAGTTAATCTTTAATAAACTATAAAGTCATGCGATTTAATAGCATTGAAA
GCTGACTCTATTAAATTGCACGGCTTAAAAGTTTGTTCACATGAAAAAAA
ATGAGAGTTCCCCCACTATATTATCTCTTATA
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