BQ622954

Overview
NameBQ622954
Unique NameBQ622954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            F PERF+ S+ D++G NFEL+PFG+GRRICPG+ + I  + L L +L+  FDW L       ++D+E++  + + K   L  VP
Sbjct:  414 FKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLELVP 497          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 3
Query:   12 PERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAV 242
            PERFL  N D KG +F ++PFGAGRR+CPG  L I ++  M+G L++ F+W L       +++M +  GL      PL AV
Sbjct:  414 PERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAV 494          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            F PERFL    DFKG ++E IPFG+GRR+CPG+ L   ML +   +L+ SF++KL N     +++M+   GL + K++ L  VP
Sbjct:  413 FRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP 496          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.738e-13
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 3
Query:    6 FIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            FIPERF+  +   DFKGQ+FEL+PFG+GRR+CP + L I M+ +   +L+  FDW L       ++ M+   GL + K E L   P
Sbjct:  410 FIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAP 495          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.738e-13
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVP 245
            TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL    +  +MDM +  GLT  +   L  VP
Sbjct:  409 TFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVP 493          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL       +MDM +  GLT  +   L  VP
Sbjct:  406 TFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVP 490          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL       +MDM +  GLT  +   L  VP
Sbjct:  406 TFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVP 490          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 3
Query:    6 FIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL------DNHNMDMEDKFGLTVQKAEPLHAVP 245
            F PERFL     +  D  G++   +PFGAGRRIC G   AI  + +ML +LI  FDW++          +DM D+FG+T+++ + L+ VP
Sbjct:  437 FFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVP 526          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAV 242
            F PER L S  D++GQ+ EL+PFGAGRRICP +  A+ +  ++L +L++ FDW L      +  D+ +  G+ V +  PL A+
Sbjct:  404 FRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAVHRMFPLFAM 486          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 3
Query:    6 FIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAEPL 233
            F PERFL ++   D +G NFEL+PFG+GRR+C G+ L + M+H  L +L++SFD        +DM + FG T  KA PL
Sbjct:  433 FKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPL 511          
The following BLAST results are available for this feature:
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
C71BN_ARATH3.922e-1342.86Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI6.691e-1343.21Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C83A1_ARATH6.691e-1344.05Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C83B1_ARATH8.738e-1343.02Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71DD_MENPI8.738e-1347.06Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C7D95_MENSP1.141e-1247.06Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR1.141e-1247.06Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71C1_MAIZE1.141e-1240.00Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71AO_ARATH1.141e-1240.96Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C82A3_SOYBN1.491e-1246.84Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00045 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622954 ID=BQ622954; Name=BQ622954; organism=Citrus sinensis; type=EST; length=532bp
ACACTTTTATTCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGC
CAGAATTTTGAGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGG
TTTACCATTGGCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTA
ACTCTTTTGATTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAA
TTTGGCCTCACCGTACAAAAGGCTGAACCCCTTCATGCTGTCCCTGTTGC
CATCTAGTTCTATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGG
TAGCCACTATATAAAGCGCTTGGTGGTTAGTTATATGTGTGTAATCATTC
TTAAGTGCGGGCGCTTTCATTTTTTTTTTATGTAGACACGTAACTTAACA
GAGTTAATCTTTAATAAACTATAAAGTCATGCGATTTAATAGCATTGAAA
GCTGACTCTATTAAATTGCACGGCTTAAAAGTTTGTTCACATGAAAAAAA
ATGAGAGTTCCCCCACTATATTATCTCTTATA
back to top