BQ622954

Overview
NameBQ622954
Unique NameBQ622954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAEPLHAVP 245
            F PER L +N DF+GQ+F+ IPFG+G+RICPG+     ++ + L +++  F+W++D        D+ +  GL V +  PL A+P
Sbjct:  411 FKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIP 494          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAEPLHAVPVAI 254
            F PER L S  D+ G++   IPFG+GRRICPG+ LA+ ++ + + +L+  FDW+ +        D+ + FGL V +  PL A P ++
Sbjct:  410 FKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPLIAFPSSV 496          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.947e-12
Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVPV 248
            F P+RFL S+ D++G NFEL+PFG+GRRICPG+ L I  + L L +L+  FDW +    +  ++++E+   + + K   L  VP+
Sbjct:  417 FNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELVPL 501          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.321e-12
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVP 245
            TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL     + ++DM +  GL+  K + +  VP
Sbjct:  406 TFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKKNVCLVP 490          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.321e-12
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVP 245
            TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL     + ++DM +  GL+  K + +  VP
Sbjct:  406 TFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKKNVCLVP 490          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 3
Query:    6 FIPERFLGSNADF--KGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAEPLHAV 242
            F P+RFL ++ D   KG +F+L+PFG+GRR+CPG+   ++ +HL L S ++SF+        +DM + FG+T  KA PL  +
Sbjct:  431 FKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVL 512          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLT 212
            TF PERF   + DF G +FE +PFGAGRRICPGL   +  + + L  L+  FDWKL       +MDM +  GLT
Sbjct:  407 TFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLT 480          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAEPLHAVPVAI 254
            F PER L S  D+ G+N   IPFG+GRRICPG+ LA+ +  + + +L+  FDW+++        D+ +  G+ V +  PL A P ++
Sbjct:  410 FKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPLIAFPSSV 496          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 35/83 (42.17%), Postives = 47/83 (56.63%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK----LDNHNMDMEDKFGLTVQKAEPLHAV 242
            F PERFL  + D KG +F L+PFG+GRR+CPG  L I +   MLG L++ F W     +    +DM +  GL      P+ AV
Sbjct:  410 FRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAV 492          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAV 242
            +F PERF   + DF G NFE +PFG GRRICPG+   +  ++L L  L+  FDWKL    +  ++D+ +  G+T  +   L+ +
Sbjct:  411 SFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLI 494          
The following BLAST results are available for this feature:
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
C71AK_ARATH1.491e-1239.29Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.491e-1239.08Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH1.947e-1241.18Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71DI_MENSP3.321e-1244.71Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.321e-1244.71Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C82A4_SOYBN4.337e-1241.46Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C71DF_MENPI4.337e-1248.65Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71AD_ARATH4.337e-1237.93Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN5.664e-1242.17Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71D7_SOLCH5.664e-1239.29Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00045 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622954 ID=BQ622954; Name=BQ622954; organism=Citrus sinensis; type=EST; length=532bp
ACACTTTTATTCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGC
CAGAATTTTGAGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGG
TTTACCATTGGCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTA
ACTCTTTTGATTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAA
TTTGGCCTCACCGTACAAAAGGCTGAACCCCTTCATGCTGTCCCTGTTGC
CATCTAGTTCTATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGG
TAGCCACTATATAAAGCGCTTGGTGGTTAGTTATATGTGTGTAATCATTC
TTAAGTGCGGGCGCTTTCATTTTTTTTTTATGTAGACACGTAACTTAACA
GAGTTAATCTTTAATAAACTATAAAGTCATGCGATTTAATAGCATTGAAA
GCTGACTCTATTAAATTGCACGGCTTAAAAGTTTGTTCACATGAAAAAAA
ATGAGAGTTCCCCCACTATATTATCTCTTATA
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